Rhizorhabdus wittichii RW1: Swit_4660
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Entry
Swit_4660 CDS
T00538
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swi03009
]
Swit_4660
Enzymes [BR:
swi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Swit_4660
Ribosome biogenesis [BR:
swi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swit_4660
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Met_10
Cons_hypoth95
MTS
Motif
Other DBs
NCBI-ProteinID:
ABQ70997
UniProt:
A0A9J9LEP7
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Position
5127708..5128925
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AA seq
405 aa
AA seq
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MSDEAVKDWEPIVRIAARGEGITADGRHSPLSAPGDLLGLDGSLQWGPHHVEPPCRHFPK
CGGCQLQQVDDQSYADFLGQRITGALAQQKIDAPPLAPAALSAPGTRRRASLHAERQGKR
MLLGFNEAQSHHIVDLRMCAVLDPKLFALVDPLRRLLHPMLRDRRAAGVQMTLVDQGVDL
LIEKVEVDGLAAIEGLNDFAQAHGLARLSVDDGYGPQPRWEPEPATVTLGGVAVPFPAGG
FLQATAEGEAALLAEVEAIVGDARLVADLFAGLGTFSLPLARTRRVYAAEGARDAVLGLK
AAADRSQRMIGIDHRDLFRRPLDAAELDRFDVVVLDPPRAGAREQMPALAATTKVRRIAY
VSCNPSTFGRDARTLVEGGWRLERITPVGQFRWSTHTELVAAFAR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgaggcagtgaaggactgggagccgatcgtccgcatcgccgcccgcggcgag
gggatcaccgccgacggccgccattcgccgctgtcggcgccgggcgacctgctcgggctc
gacggcagcctgcaatgggggccgcaccatgtcgagccgccgtgccgccattttcccaaa
tgcggcggctgccagctccagcaggtcgacgaccaatcctatgccgatttcctcggccag
cggatcaccggcgcgctggcccagcagaagatcgacgcgccgccgctggcgcctgccgcg
ctgtccgcgcccgggacgcgccgccgcgcctcgctccacgccgaacgacagggcaagcgg
atgctgctcggcttcaacgaggcgcagagccaccatatcgtcgacctgcgcatgtgcgcg
gtcctcgatccgaagctgttcgcgctggtcgatccgctgcgtcggctgctccacccgatg
ctgcgcgaccggcgcgcggcgggggtgcagatgacgctggtcgaccagggcgtcgacctg
ctgatcgaaaaggtcgaggtcgacgggctcgccgcgatcgagggactcaatgatttcgcg
caggcgcatggcctcgcgcggctgtcggtcgacgacggctacggcccgcagccgcgctgg
gagcccgagccggcgacggtgacgctgggcggcgtcgcggtgcctttcccggcgggcggc
ttcctccaggcgaccgccgagggcgaggcggcgctgctcgccgaggtcgaggcgatcgtc
ggcgacgcccggctggtcgccgatctcttcgccgggctcggcaccttctccctcccgctg
gcgcggacgcggcgcgtctatgcggccgagggcgcgcgtgacgcggtgctggggctgaag
gcggcggccgaccgcagccagcggatgatcggcatcgaccatcgcgacctgttccgccgg
ccgctcgacgccgccgaactcgaccgcttcgacgtggtcgtgctcgatccgccccgcgcg
ggcgccagggaacagatgcccgcgcttgccgcgacgacgaaggtgcggcggatcgcctat
gtctcgtgcaacccctccaccttcggccgcgacgcgcggacgctggtcgagggcggctgg
cggctggagcggatcacgccggtcggccagttccgctggtcgacccacacggaactggtg
gcggcgttcgcacggtag
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