Shewanella piezotolerans: swp_0510
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Entry
swp_0510 CDS
T00791
Name
(GenBank) Ribonuclease E and G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swp03019
]
swp_0510
03009 Ribosome biogenesis [BR:
swp03009
]
swp_0510
Messenger RNA biogenesis [BR:
swp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
swp_0510
Ribosome biogenesis [BR:
swp03009
]
Prokaryotic type
rRNA processing factors
swp_0510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ACJ27338
UniProt:
B8CI62
LinkDB
All DBs
Position
527672..529180
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AA seq
502 aa
AA seq
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MNTGRIVPGRVQRKIGSELLINVTPTEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKV
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGNFVVRDIAELVRQGQDIMVQ
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIESEEIRARLKKITEPFVDDDG
GFIIRTAAESAGEDELVQDAAFLRRVWAKVSERRKRRGVSLLYQDLALPVRIVRDFVGTE
LDQIQVDSNQTYEELQQFAHEFMPEIANKLEHYNGPIPIFDLYDVENEVQRALGRKVELK
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
FIDMQEAEHQKRVLSSLEAALSVDRVKTNISGFSGLGLVEMTRKRTRESLEHVLCGECPS
CLGTGSLKTVETVSYEIFREIIRLNRGYDADEFLVYCAPAVYHSLKGDESHLLAELEVYI
SKRVRLQNEPMYAQNKFDVVIM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacaggtcgaatcgtgccaggtagagtccagagaaaaattggttctgaactactg
atcaatgtgacaccaactgaggctcgagtagctttggttgagcacggtgtattgcaagaa
gttcatatcgagcgacgcatgaagcgcggcttggtgggcaatatctataaaggtaaggtt
agccgcgtactgcctggtatgcaggctgcatttgtcgatattggcttagataaagccgct
tttttgcatgcctcggatatcgtgccgcatacagagtgtgttgcagatgtggagaaaggc
aattttgttgtacgtgatattgctgagcttgttagacagggccaggatattatggtgcag
gtggttaaagatcctcttggtactaaaggcgctcgcttaactaccgatattactctgcca
tctcgttatctggtctttatgcctggttctagccatgtcggtgtttctcagcgtattgaa
agtgaagaaattcgcgcaagactaaagaaaataactgaaccctttgttgatgatgatggt
gggtttattatccgcaccgcagcagagagtgctggcgaagatgagctggtgcaagatgcc
gcttttttaaggcgtgtctgggctaaagtcagcgagcgtcgtaagcgccgaggagtatca
ttactctatcaagatttggctctgccagtgcgaatcgtacgcgactttgtcggtactgag
cttgaccaaattcaagttgattctaatcagacctatgaagagctacagcagtttgcccat
gagtttatgccagaaattgccaataaacttgaacactacaatggtcctatccctattttt
gacctctatgatgtcgaaaatgaagtgcagcgcgcattaggccgtaaggtcgagctaaag
tctggtggctacctgattatcgatcaaaccgaagcgatgacaacggttgatatcaatact
ggcgcttttgttggtcaccgaaatctagaagaaactattttcaacactaatcttgaagcg
acccaagcgattgcccgccaattaaggctacgtaatttaggcggcattatcattatcgac
tttattgatatgcaagaagctgagcatcaaaagcgggttctttctagccttgaagctgca
ttgtcggtcgatagagttaagactaatattagtggtttttcaggccttggcttggttgag
atgacgcgtaagcgtacccgtgaaagtctagagcatgtgctgtgcggcgaatgcccctct
tgccttgggactggaagcttaaaaacggtagagacagtttcatatgaaatcttcagagaa
ataattcgcttgaatcgcggctatgacgccgatgagttcctagtttattgcgcgccagcg
gtataccacagccttaaaggtgacgagagccatcttttagctgagctcgaggtgtatatc
tctaaacgagtgcgcttgcaaaatgagcctatgtacgctcagaataaatttgatgtggtg
ataatgtag
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