KEGG   Sphingobium sp. YBL2: TZ53_14875
Entry
TZ53_14875        CDS       T03855                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
syb  Sphingobium sp. YBL2
Pathway
syb00010  Glycolysis / Gluconeogenesis
syb00020  Citrate cycle (TCA cycle)
syb00260  Glycine, serine and threonine metabolism
syb00280  Valine, leucine and isoleucine degradation
syb00310  Lysine degradation
syb00380  Tryptophan metabolism
syb00620  Pyruvate metabolism
syb00630  Glyoxylate and dicarboxylate metabolism
syb00640  Propanoate metabolism
syb00785  Lipoic acid metabolism
syb01100  Metabolic pathways
syb01110  Biosynthesis of secondary metabolites
syb01120  Microbial metabolism in diverse environments
syb01200  Carbon metabolism
syb01210  2-Oxocarboxylic acid metabolism
syb01240  Biosynthesis of cofactors
Module
syb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
syb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
syb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
syb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:syb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    TZ53_14875
   00020 Citrate cycle (TCA cycle)
    TZ53_14875
   00620 Pyruvate metabolism
    TZ53_14875
   00630 Glyoxylate and dicarboxylate metabolism
    TZ53_14875
   00640 Propanoate metabolism
    TZ53_14875
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TZ53_14875
   00280 Valine, leucine and isoleucine degradation
    TZ53_14875
   00310 Lysine degradation
    TZ53_14875
   00380 Tryptophan metabolism
    TZ53_14875
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TZ53_14875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:syb04147]
    TZ53_14875
Enzymes [BR:syb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     TZ53_14875
Exosome [BR:syb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   TZ53_14875
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 NAD_binding_8 AlaDh_PNT_C Thi4 HI0933_like FAD_binding_3 Lys_Orn_oxgnase 3HCDH_N
Other DBs
NCBI-ProteinID: AJR24814
UniProt: A0A0C5X6P8
LinkDB
Position
3222585..3223985
AA seq 466 aa
MADFDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASE
LYEEAANGALAKLGVKIDKMSLDLDTMQGQRKEAVKGLTGGIEYLFKKNKVDWLRGLASF
TGANTVEVAGKTVTAKNIVIATGSSVTPLPGVAVDNAGGRIVDSTGALELDKVPGHLVVV
GGGVIGLELGSVWRRVGAKVTVVEFLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTS
AEVGKKGVTLTVEPAAGGEAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDH
DFATKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAG
VGLTEEAAKEKGAIKVGKFPMLANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAGT
MIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggcagacttcgattatgatgttctggtgattggcgccggtcccggtggttatgtcgcg
gcgatccgcgcggctcagctcggcctcaagaccgcctgcgccgaaagccgcgagacgctg
ggcggcacctgcctcaatgtcggttgcattccgtccaaggcgctgctgcacgcttcggaa
ctgtatgaggaagccgccaatggcgccctcgccaagctgggcgtgaagatcgacaagatg
agcctggacctcgacaccatgcagggccagcgcaaggaagcggtgaagggcctgaccggc
ggcatcgaatatctgttcaagaagaacaaggtcgactggttgaggggtctggcgagcttc
accggcgccaacaccgttgaagtcgcgggcaagacggtgacggcgaagaacatcgtcatc
gccaccggctcgtcggtcacgccgcttccgggcgttgcggtagacaatgcggggggcagg
atcgtcgattcgaccggcgcgctggaactggacaaggttcccggccatctggtcgtcgtc
ggcggcggggtcatcgggctggaactgggttcggtatggcgtcgcgtcggtgcgaaggtc
acggtggtcgagttcctcgaccagatcctgccgggcatggacggcgaagtccgcaaggaa
gcgaacaagatcttcaagaagcagggcttcgaatataagctcggcaccaaggtcacgagc
gcggaagtcggcaagaagggcgtgaccctgaccgtcgagccggccgccggcggcgaggcg
gagaagatcgaggccgatgtggtgctggtgtcgatcggccgtcgtccgaacacggagggg
ctgggtctcgacaagatcggtctggaactcaatgcccgtggccagatcgagaccgatcat
gacttcgcgaccaaggttcccggcgtctgggccattggcgacgtcatccccggcccgatg
ctcgcgcacaaggccgaggatgaaggcattgccgtggccgagaatatcgcgggcctgacc
gggatcgtgaaccatgacgtgatcccgtcggtggtctataccaagccggagatcgctggc
gtgggcctgacggaagaggccgccaaggaaaagggcgcgatcaaggtcggcaaattcccg
atgctggcgaacagccgcgccaagaccaaccatgagcccgatggcttcgtgaagatcatt
gccgatgcagaaaccgacaaggtgctgggcgtctggatcatcgcgacggttgcgggcacg
atgatcgcgcaggcggcgcaggcgatggaattcggcgcttcgagcgaggacattgcctat
acctgccacgcgcatccgacgcatagcgaggcgatcaaggaagcggccatggccgtgacg
ggcaagccgatccacatctga

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