Synechococcus sp. PCC 6312: Syn6312_0166
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Entry
Syn6312_0166 CDS
T02370
Name
(GenBank) PAS domain S-box
Organism
syne
Synechococcus sp. PCC 6312
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HisKA
HATPase_c
PAS_3
PAS
PAS_9
PAS_4
dCache_1
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AFY59417
UniProt:
K9RQQ6
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All DBs
Position
173068..176232
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AA seq
1054 aa
AA seq
DB search
MINDARFLVQRFLLIFVPVSALIGLFLGYIYTNQKNNTRLDYQLREESKIERGISTISNT
YERVISDIRTLGSQSSVQTILQKGLAAPEYYLRDIKDYTQNKGLYDALHFLNPDGVEVVR
FVLDSQHQAQLSQPQLGKQLATSLGIDSAALSQWHSKDIQADPMELKTDSGRILQPYYPL
IRFVTPIFSQNRKFQGTLVVDYTANDLFKDFGQNCISPLGSCQLLNAEGDWILGEQPDDH
WSFMFPSLEKQSFALRYPQVWQLLQTQSSGQIETADGLFTFKRITPQGTKQNNHGYIIVS
RVSDQALSASVAPLRLQFIGLFCILTLAVAGVSAKISWEQLRQYHLNQTLEASERTFRYL
SDMLPVGVFQANAEGMSTYSNQKMLEIYGLSQAELTRGDWVNFIHPDDRKAMVNSWFDSV
KKQTSWQHQFRLVRDGQERWIVGRGTPVFVDGQLTGYIGSYEDMTQAMEQQQYLAQAKEA
AEQASRAKSDFLATMSHEIRTPMNAIIGLTGLLLDMELTEQQHEFLNTIRASGDALLSLI
NDILDFSKIESGRLEIEAYPFDLRACAEEALDLLAGRANEQGLELAYHMEPNTPVAVTGD
MGRLRQILVNLIGNALKFTAAGEVVLYIQAHPLTPVNPDPTPEATEDTHYPIHQPYVFQF
AIRDTGIGISPQGVTRLFQPFSQVDASTTRYFGGTGLGLAICKRLAEAMGGTIWLESCDG
SGKLAKAGQPHSGFTPSPSSQLTNRGSTFYFTVTMPVNLQAEEQKSAHTIASLQGRKVLI
VDDNATNRQILELQTTSWHMEPQAYPDAKSALTALKAGANFDLAILDLHMPHMNGLELGQ
AIHGLEAHKHLPLIMLSSVGQGNALIASQHFAAAIAKPIKQSALFNVLLRILNEFQASQT
VQKPVTLSPETSMADLAKHLPPLKILLAEDNKVNQMVALRILERLGYRADVVANGLEVLA
ALQRQPYDVVLMDMQMPEMDGVTATQEIIRARPSQNRPFIIAMTANAMEGDRDICLDAGM
DDYLSKPIKIPELVRALGQCQPITATRAEKLGYN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatgatgcccgttttttagtccagcgatttctcctcatatttgtaccggtgtcg
gccctgattggcttatttctgggctacatttatacaaatcaaaaaaataatactcgacta
gattaccaattgcgggaagagtccaaaattgagcggggtataagtaccattagtaacacc
tatgaacgagtcatttcggatattcgcacccttggctctcaaagtagtgttcaaacaatc
ttgcaaaagggtctagcggccccggaatattatttaagagatattaaagactacacccaa
aataagggtctttatgatgcactgcattttcttaatcctgatggtgtagaagttgtccgc
tttgtcctagattctcagcaccaggcccaactgagtcaaccccagctcggtaaacaactg
gcaacgtcattaggcattgattccgcggccttgagtcaatggcattccaaagatattcaa
gcggatcccatggagttaaaaaccgattcgggacgaattctgcagccttactatccacta
attcgttttgttacgccgatcttttcccaaaaccgtaaatttcaaggcacccttgtagtt
gattacaccgccaatgatctgttcaaggactttggtcaaaactgcattagtcctttaggc
tcttgtcaattactgaatgctgaaggggactggattctcggagaacagccggatgatcat
tggtcattcatgtttccatctttagaaaaacaatcctttgccctgcgatacccacaagtg
tggcaattgctccaaacccaatcatcggggcagatcgaaaccgctgatggcctgtttacg
tttaagcgaattaccccccaagggacaaagcagaacaatcacggctacatcattgtttcc
cgtgtttcagatcaggctttatcggcttcggttgctcccttacggctgcaattcatcgga
ttattttgcatcttaaccttagcagtggctggtgtttccgccaaaattagttgggaacag
ttacgccaatatcatctgaatcaaactttagaggcgagtgaacgcacatttcgctatctg
agtgatatgttgcctgtgggtgtgttccaggccaatgccgaagggatgagtacctattcc
aatcaaaaaatgctagagatttatggcctttcccaagcagaattgacccgcggggattgg
gtgaactttatccatcccgatgatcgcaaggcaatggtgaattcctggttcgatagtgtt
aaaaagcaaacatcatggcagcatcagtttcgcttagttagagatgggcaggagcgatgg
attgtcggacgtgggacaccagtatttgtggatggtcaattaacagggtatatcggtagc
tatgaagacatgacccaggccatggagcagcaacaatatttggcccaggccaaggaagca
gcagaacaggccagtcgggctaagagtgattttctcgccaccatgagccacgaaattcgc
acccccatgaacgccattattggcttaactggcctgttgttagacatggaattaaccgaa
cagcaacatgagtttttgaatacaatccgcgccagtggcgatgccttactcagcctaatt
aacgatattttagacttctccaaaattgagtcaggacgactggaaatagaagcttatccc
tttgatctgcgggcctgtgctgaggaagccttagatttgctggccgggcgggctaatgaa
cagggcttagagttggcttatcacatggaacccaataccccggtcgcggtgacgggcgat
atggggcgattacgacaaattttggtcaatctgattggtaatgctttgaaatttacggcg
gcaggggaagtagtgctttatatccaggcccatcctctcactcccgttaatcccgatccc
accccagaggcgacggaagatactcactaccccatccatcagccctatgtctttcaattt
gcgattcgtgacaccggaattggtatttctcctcagggcgtgacccgtctctttcagcct
tttagtcaagtggatgcttcaacaacgcgctattttggcggaactggcctgggtctagcc
atttgtaagcgtttagcagaggcgatgggagggacgatctggcttgaaagttgcgatggc
agtggcaagctggccaaggctggacaacctcactcaggctttactccaagtccctcctct
caactcaccaacagggggtcaaccttttatttcaccgtcacgatgcccgtaaatctccag
gccgaggagcagaaatccgcccacacgattgcctctctccaaggccggaaagtcttaatt
gtggacgataacgccaccaaccgccaaattttagagttacaaaccacatcctggcacatg
gaaccccaagcctatcctgatgctaaatcggcgttaacggccctaaaggcgggggctaat
tttgatttagcaattttggacctacatatgcctcacatgaatggcctggaattgggacaa
gcgattcatggtctagaggcccacaaacatctccccttaatcatgctttcatctgttgga
caggggaatgccctaattgccagtcaacattttgccgccgcgattgcgaagccgatcaaa
caatccgccctctttaatgtcctactgcgcatcttgaatgaattccaggccagccaaaca
gtccaaaagcccgtgaccctctcccctgaaacttcgatggctgatttggccaaacatctt
cctcccttgaaaatcttactagcagaagataataaggtcaatcaaatggttgccttgcga
attctagaacgcttagggtatcgggcagatgtggtggccaatggcctggaggtactcgca
gcactccaacgacaaccctatgatgtggtcttgatggatatgcaaatgccagaaatggat
ggagttacggccactcaagaaatcatcagggccaggccctcgcaaaatcgtccctttatt
attgccatgacggccaatgccatggagggggatcgagatatttgtttagacgcggggatg
gatgactatctcagtaagcccattaaaattccggaattagttcgagccttaggccaatgt
caacccataacagcaacaagagccgaaaaattgggctataattag
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