Parasynechococcus marenigrum: SYNW0127
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Entry
SYNW0127 CDS
T00144
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYNW0127 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syw01007
]
SYNW0127 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syw03016
]
SYNW0127 (lysS)
Enzymes [BR:
syw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SYNW0127 (lysS)
Amino acid related enzymes [BR:
syw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SYNW0127 (lysS)
Transfer RNA biogenesis [BR:
syw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SYNW0127 (lysS)
Prokaryotic type
Other AARSs
SYNW0127 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CAE06642
CyanoBase:
SYNW0127
UniProt:
Q7U9X5
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All DBs
Position
124707..126215
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AA seq
502 aa
AA seq
DB search
MSELRDTRLEKCQALSDLGQGPYALNFEPTHRMAALHEAHADLPNGEEREVTVSVAGRVM
TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITGLVDGGDWLGVSGTLRRTD
RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLIVSPDSRETFRRRARLVS
GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF
ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGSCQIT
YQDTEIDLSPPWRRATMHELVEEATGLDFNSFSSREAAAVAMTGKGLHAPELADSVGRLL
NEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTD
PVDQRQRLEAQQARKAAGDLEAQGLDEDFVTALEVGMPPTGGLGIGIDRLVMLLTDSPSI
RDVIAFPLLRPEPRAADAPAMG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagctgcgcgacacccgtttggagaagtgccaggcactgtctgatctgggccag
ggtccctacgccctcaactttgagccgacccatcgcatggcggccttgcatgaggcccat
gccgacctccccaatggcgaggaacgtgaggtgacggtgtccgtcgccgggcgggtgatg
acccggcgggtgatgggcaagctcgcctttttcaccctggcggatgagaccggcaccatt
cagctgtttctggagaaagcgggcctggaggcgcagcaggagggctggttcaagcagatc
accggtctggtcgatggcggcgactggcttggggtgagcggcacgctgcgccgcaccgat
cgcggtgagttgtcggtgaaggtgagcgattggcgcatgctcaccaaggcgctgcaaccg
ctgccggataagtggcacggcctggccgatgtggagaagcgctaccgccagcgctatctc
gacctcatcgtgtcgccggacagccgggagactttccgccgccgggcacggttggtgagc
ggcatccgccgctggctggatcaacgtgattttctcgaaattgagactccggtgctgcag
agcgaaccgggcggtgccgatgctcggcccttcgagacccaccacaacgctcttgatctt
cccctcaccctgcgcatcgccaccgaactgcatctcaaacgcctggtggtgggtggcttc
gagcgggtgtacgagctgggccggatctttcgcaatgaaggggtcagcacccgccacaac
ccggaattcacctcggtggagatctatcaggcctactccgattacatcggaatgatggag
ctcactgagcagatggtcagcgccgtttgccaggaggtgtgcggcagttgccagatcacg
taccaggacaccgagattgatctcagccccccctggcgacgggccaccatgcatgagcta
gtggaggaagccaccggtcttgatttcaatagcttcagcagtcgggaggcggcggctgta
gcgatgaccggcaagggcctgcatgcacctgaactggccgattccgtggggcgtctgctg
aatgaagcgttcgagcaggcggtggagacaacgctgattcaacccacctttgtgaccgat
tacccggtggagatttcaccgttggcccggcctcaccgcagcaaacccggcctggtggaa
cgttttgagctgttcatcgttggccgcgagcatgccaatgccttcagtgagctcaccgat
ccggtggatcagcggcagcgcctggaggcccagcaggcccgtaaggctgccggggatctc
gaagcgcaggggttggatgaagacttcgtcacggccctcgaggtgggcatgcctcccacc
ggtgggttgggtattggtatcgatcgtttggtgatgctgctcacggatagcccatcgatc
cgtgatgtcattgccttcccgcttctgcggccggagcccagggcggcggatgcccccgca
atgggataa
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