Parasynechococcus marenigrum: SYNW2338
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Entry
SYNW2338 CDS
T00144
Symbol
rnhA
Name
(GenBank) possible ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYNW2338 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syw03032
]
SYNW2338 (rnhA)
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SYNW2338 (rnhA)
DNA replication proteins [BR:
syw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
SYNW2338 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
SYNW2338 (rnhA)
Elongation factors (archaeal)
SYNW2338 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
CAE08853
CyanoBase:
SYNW2338
UniProt:
Q7U3U1
LinkDB
All DBs
Position
complement(2241126..2241872)
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AA seq
248 aa
AA seq
DB search
MAEERGRVVAAATDGACSGNPGPGGWGALLRFEDGSVEEFGGHDPATTNNRMELQAALEL
LQRLKQLPRHPDLTIRTDSKYLIDGLGSWMKGWKRKGWKTAAGKPVLNQDLWKALDAARL
DDVPLAYVKGHSGDPDNDRVDRIAVAFSQGRSLDLGQPAVESDVAAVDVDADPAPQPLVQ
LLNRLELADRLADGGFSLSLVELAQLVELPLKQLEQRRESWSWRDWRVHPDKEGRWTLQR
REAGSEQS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaacgtggtcgggttgtggctgcagccaccgatggagcctgcagtggcaac
ccgggtccaggcggttggggcgctttgctgcgatttgaagatggcagtgttgaggaattc
ggcggccatgacccggcaacgaccaacaaccgcatggaactgcaggcggcgctggagttg
ctgcagcgcctgaaacaactgccacgccatcccgatctgacgattcgcaccgacagcaag
tacctgatcgatgggctcggctcctggatgaagggctggaagcgcaagggttggaagaca
gcggctggcaagcctgtgctcaaccaggatctctggaaagccctggatgcagctcggctg
gatgatgtgccgctggcctacgtgaaaggtcacagcggtgatccggacaacgaccgtgtc
gaccggatcgcagttgctttttcccaggggcgttcgttggatctcggccagccagccgtt
gagagcgacgttgcggcagtcgatgtcgatgctgatccggcaccacaaccgctggtgcag
ttgctgaaccgcctggagctggcggaccggttggcggatggagggttcagtctcagcctg
gtggagctggcgcagctggtggaactcccgctcaagcagctggagcagcgtcgggagtcc
tggagctggcgggactggcgggtgcacccggataaggagggtcgctggaccctgcagcgt
cgcgaggcaggatcagaacagtcctga
DBGET
integrated database retrieval system
