Synechococcus sp. WH 7803: SynWH7803_1508
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Entry
SynWH7803_1508 CDS
T00524
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
syx
Synechococcus sp. WH 7803
Pathway
syx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SynWH7803_1508 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syx03400
]
SynWH7803_1508 (recB)
Enzymes [BR:
syx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SynWH7803_1508 (recB)
DNA repair and recombination proteins [BR:
syx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SynWH7803_1508 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_11
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAK23934
CyanoBase:
SynWH7803_1508
UniProt:
A5GLW9
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All DBs
Position
1381620..1385309
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AA seq
1229 aa
AA seq
DB search
MTGPGDARTIRFEPNRYPLNPGLRLLEASAGTGKTFALAHLVMRLVVERELKLDALLVVT
FTEAAADELRDRIGKRLDGALQGLLCLEQGGDGEAMATDAVLQEWLAEHGRDPTGRKSKA
SLLLEALEALERADITTIHGFCRRTLRRQALDSGRSMDLSVDDDPQTLVEEVAHDLWREQ
VLTLDPDDVAGLLQSGLREDTLTAELLRLDGDCGVRIAEDAEVIDTETALRDVFPIWLEQ
RWLQVGELWSQDGDALERCLRDCAQDWHSLGCKDTKPYSRNPRKNRAALLSTWLQTKNDT
QSLPIRYANVRNQDLLGTYYHPGVFAKTARKCGEDAPSLPRPELMRAIAELWDGPGEQTW
RYLLIRGLQEIDQRRQRRGVVGFSGLLDALNPTDPSRSQAWITALRERYKVALIDEFQDT
DPLQWNLLHQCFASSDHLLLMVGDPKQAIYRFRGGDLQTYKTARAQVDRIDDLLDNRRTT
PPLMEAMNHLMSPGLKHSELSVPAVSAKASCTPLTLPPETAPLQILAFNPDDADGSRSRT
DLEATIPCFAADLLLQILGNDASLTPADFCILVSRHRQAEAIRDQLSKVGLPSRLISPGD
VLSSQGAGELQWFLDGLARPADNERLRRLAAGALMQWPAHTLEACEQTGQLDLFAAKLQT
LAEALPRLGLMGCLAQLLEGETLADLSIRGRLLGDLLQCARLVQDAMHRQGLNAAGGADW
LRRQRLHPPDNVPDQRQPYSDLAASAVAVVTVHRSKGLQYPVVICPYLWEAPSPGKGPLW
RLPAGDPTGSWRVALNPHWGSGQAAACADALDCMAEAERLAYVALTRAERHLVLFSAGEA
NPSGNPLDPWLSALADGNHPHISLHHPRSPAAHQRWTPPRQNQTLQCAPVPKGALDRSWG
RSSYSAWIASASNHHPSKRSNPHELEEGRDVDAGTDTSSLREPAVGLSSDVERELGDALP
PRNGALRTFPRGASAGDCLHRILEQLPFDQPVEQPANQELVARELSRSGLDLSLQDDVLS
AISTLLRSPFGGPLGQLRLADLHSGRRLHELSFDLPVAHAGSAVRASTLARAFRCDPKQR
FGSDYAAQLETLDIHSRGFLTGSIDLVFTDGDDLSTARWWVADWKSNWIGERDGEGQPLH
CGPRHYTQAAMEEQMLQHHYPLQAHLYLVALHRFLQWRLIDYSPERHLGGYAYVFLRGVS
EQGGSGVIIEPAPLQRLEHLNTLLQGTQP
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcccaggggacgcccgcaccatccggttcgaaccgaaccgttacccgctcaac
ccagggctgagattgttggaggccagtgcaggcaccggcaaaacctttgccctggcccat
ctggtgatgcgactcgtggtggaacgggagctcaaactcgatgcgctgctggtggtgacg
ttcacagaagccgcggccgacgaactgcgcgaccggatcggcaagcgactcgacggagcg
cttcaaggccttctatgtcttgaacagggaggcgatggcgaggccatggcgaccgatgcg
gttcttcaggaatggctggcggagcacggccgcgatccaacagggcgtaaaagcaaggcg
agcctgcttcttgaagctctcgaagcactggagcgagccgacatcaccaccatccatggc
ttctgccggcgcaccctccgccgccaagccctggacagtggccgaagcatggacctctcc
gttgatgatgaccctcagaccctggtggaagaggtcgcccatgacctctggcgcgaacag
gtcctcacccttgatcccgatgatgtcgctgggctcttgcagtcagggctgcgggaagac
accctgacggccgaactcctgcgtcttgatggtgattgcggtgtgcggatcgccgaagac
gccgaggtcattgatactgaaaccgctctgcgggatgtctttcccatctggctcgagcag
cgctggttgcaggttggcgagctctggagccaggacggcgacgccctcgagcgttgcctg
cgcgattgcgcgcaggactggcacagcctcggctgcaaggacacgaagccgtacagccgc
aaccccagaaagaatcgcgccgctctgctgagcacctggcttcagacaaagaacgacacg
caatcgttaccgattcgttacgcaaacgtgcgcaatcaggacttactgggcacttattac
cacccgggcgtctttgccaaaacagcccggaaatgcggcgaagacgcaccgagtctgccc
agaccggagctgatgcgagccatcgctgaactctgggatggacctggggagcaaacctgg
cgctatctgctcatacgcggcttgcaggagattgaccaacgacgccaacggcgcggggtg
gtgggtttctccggcctgctcgatgcactgaacccaaccgatccatcccgatcccaagcg
tggatcacagccctgcgcgagcgttacaaggttgcgttgatcgatgaatttcaagacacc
gatcccctgcagtggaacctcctgcaccagtgctttgcctccagtgaccacctgctgttg
atggtgggtgaccccaaacaggcgatttatcgctttcgcggtggtgatctccagacctac
aaaactgctcgtgctcaggtcgatcgcatcgacgacctgctcgataaccggcgcaccaca
cctccactgatggaggccatgaatcacttgatgtccccaggactcaagcactccgaactc
agcgttccagcggtatcggcgaaggccagctgcacccctctgacgctcccgccagagacg
gcccccctgcaaatcctcgcgttcaatcccgatgatgccgatgggagcaggagccgaacc
gatctggaggcgaccatcccttgcttcgctgcggatctgctgctccagatcctcggcaac
gacgcctcgctcacgcctgccgacttctgcatccttgtgagtcgccaccgacaggctgaa
gcgatccgtgaccagctttcaaaggttggcctgcccagccgcctgatcagcccaggggat
gtgctcagcagccagggggccggtgagttgcagtggtttctcgatggcctggcccgacca
gcggacaatgaacgactgcgtcgactggcggcaggagccctgatgcaatggcctgctcac
accctcgaggcctgcgaacaaaccggacagctcgacctgttcgccgccaagctgcagacc
ctggccgaagccttgccacggctgggactgatgggctgcctggcccagttgctggaaggg
gaaaccctggcggacctctccatccgcggacggctccttggggatctgctgcagtgcgca
cgcctggtgcaggacgccatgcaccgacaagggctcaatgctgcaggaggggccgactgg
ctacgccgccaacgcctgcatccaccggacaacgtgccggatcagcgtcagccctacagc
gatctggcggccagcgccgtggccgtggtgacggtgcaccgcagcaagggcttgcaatat
cccgtggtgatttgcccttacctctgggaggcgccatcccctgggaaagggccgctatgg
cgtcttcccgcaggcgatcccacagggagctggagggtggccctgaatccgcactggggc
agcggccaggccgctgcctgcgccgacgcactggactgcatggcggaggccgaacgcctg
gcctacgtggcgctcacccgcgctgaacgccatttggtgctgttcagcgctggagaagcc
aaccccagtggcaaccctctggatccctggctgagtgcactggccgatggaaaccatccg
cacatcagcctgcatcatccgcgttctccagcggcccatcagcgctggaccccacccaga
cagaaccagacactgcagtgtgcaccagtcccgaagggagccctggatcgctcctgggga
cgcagcagctactcggcatggatcgccagtgcctcgaaccaccacccaagcaagcgcagc
aacccccacgaactcgaagaaggccgggatgtggatgcgggcaccgacacctcttcgctg
cgcgaaccagccgtagggcttagcagtgacgttgaacgggagttaggcgacgccttgcca
ccacgcaatggcgctctcagaacattcccccgcggcgcgtcagcaggggattgcctgcac
cggattctggagcagcttcccttcgatcagccggtcgaacaacccgccaaccaggagctc
gttgcccgagagctgagccgttcaggcctagacctctccttgcaggatgacgttttgagc
gccatcagcaccctgctccgttcaccgtttggcggacctctcggccagctgcgcctggct
gatctccacagcggccggcgcctgcatgaactcagcttcgatcttccagtcgcccatgca
ggcagcgctgtgcgggcctcgacgctcgccagagccttccgctgcgatcccaagcagcgg
ttcggttcggactacgccgcgcagctggagacgctcgacattcacagccggggctttctc
accggctcgatcgatctggtgttcaccgatggggatgatctgagcacggcccgatggtgg
gtcgccgattggaaaagcaactggatcggcgagcgggatggtgaaggtcagcccctgcac
tgcggcccgcggcactacacccaagccgcgatggaggagcagatgcttcagcaccactac
ccgcttcaagcccacctctacctggttgccctgcaccgcttcctgcagtggcgcctgatc
gactattcccctgagcgccatctcggcggctatgcctacgtctttctgcgcggcgtcagt
gagcagggaggaagcggggtcatcatcgagccagccccattgcaacggctcgagcatctg
aacacgcttctccagggaacccagccatga
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