Synechocystis sp. PCC 6803: MYO_410
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Entry
MYO_410 CDS
T02468
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
syz
Synechocystis sp. PCC 6803
Pathway
syz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYO_410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syz03400
]
MYO_410
Enzymes [BR:
syz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MYO_410
DNA repair and recombination proteins [BR:
syz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYO_410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
HHH_5
AAA_11
PIF1
DNA_pol_lambd_f
HHH_2
HHH
Helicase_RecD
T2SSE
nSTAND3
PhoH
UvrD-helicase
AAA_22
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
14612756
NCBI-ProteinID:
AGF53557
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Position
pSYSA_M:complement(join(98966..100749,1..85))
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AA seq
622 aa
AA seq
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MEKSTDYLTGVIERITFHSEETGYTVARLQMSRAKELTTVVGNFANIQAGQTLKLAGIWK
EHPKYGSQFQVNNYHETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLETLEIIEGE
SDRLMEVTGIGKKRVRMIQRAWAEQKAIKEVMLFLQGHGVSTTYAVKIYKEYGDDAIRVV
THNPYQLADDIFGIGFLTADKIAQQVGIDPTSKFRYRAGILHTLGEAAEQGHCYLPQPEL
IKAAIAKLSTEEYEAMAEALLAVIEEMVAVQDLIREILSEEEILLFKPTFYHTECKLAGY
VKQKLVNSQIIDIDRVKTWINRYTDKNELELSKQQYTAVLLAATTGVMILTGGPGTGKTF
TTRTIVALWRAMGKKIGLAAPTGRAAQRLGEMTGLEAKTLHRLLEFDPNSMGFKRNEDNP
LPFDAVIVDESSMLDLFLAHSLLKAISPNTQLLLVGDIDQLPSVGPGSVLGDLIASEQIT
MVRLNQVFRQAAASAIIRHAHQINRGQYPPMEAISDQPLSDCLWHNGGTEPDHGVQLIGE
LLTDFIPKQGFNLLQDVQVLCPMQRGIIGARNLNAVVQSIVVSNKAETLNATVRTDNFIK
RRVNRSVHSSSFQGTKVMLNII
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcaacggattatttgactggggtgattgagcgcattacgttccattccgag
gaaactgggtacacggtggcgcgcctacaaatgtctagggctaaggaattaacgacggtg
gtggggaattttgccaatatccaagcggggcaaaccctgaaattagcaggcatttggaaa
gaacatcccaaatacggttctcagttccaggtcaataattaccacgaaaccaagccagct
acgttgacgggcattgaaaaatacctaggcagtggcctaatcaaaggggtagggccggtg
acagcgaaaagaattgtggctcattttggtttggaaaccctggaaattattgagggggag
agcgatcgcctgatggaagtaacaggcattggcaagaaacgggtcaggatgattcaaaga
gcatgggcggaacagaaagcgattaaagaagtgatgcttttcctccagggccatggggta
tccaccacctacgcagtcaaaatttataaagaatatggagatgatgcaatccgggttgtg
acccataacccctaccaattggcggacgatatttttggtattggttttctaacggcggat
aagattgcccaacaggtcggcattgaccccacgtctaagtttcgttatcgggcaggaatt
ctccatacccttggggaagcggcggaacagggccattgttatctcccccaaccagaattg
atcaaagcggcgatcgccaagttgagtacggaagaatatgaagcaatggcagaggcatta
ctagcggtaattgaggaaatggtggcagtgcaggatttgatacgggaaatattaagtgag
gaggaaatattgctattcaagcccactttttatcatacggaatgcaaattggccggttat
gtgaagcaaaagttagttaatagccaaattattgacatagatagagtaaaaacctggatt
aaccgttatacagacaaaaatgaactggaattatctaaacaacaatataccgctgtctta
ttggcggctacgacgggagtaatgattctcacgggtggccctgggacgggcaaaaccttt
actacccgcaccattgtcgctctttggagagcgatgggtaaaaagattggtttagcggct
cccacaggtagggcggctcaaagattaggggaaatgacggggttggaagcaaaaacattg
catcgtttgctggaatttgatcccaatagcatgggctttaagcgtaatgaagataatcct
ttgccctttgatgcggtgattgtggatgagtcctctatgttggatttattcctagcccat
tccctcctcaaagctatttctcccaatactcaactgctattggtgggggatattgaccag
ttaccttctgtggggcccggtagtgtgttgggggatttgattgcttcagagcagataacc
atggtcaggttaaaccaagtttttcgtcaggcggcggctagtgccatcattcgccatgct
catcaaattaacaggggtcaatatccgccaatggaagctatttctgatcagcctctatca
gattgtctttggcacaatggtggcacagaaccagaccatggagtgcaattaattggggaa
ttactaacagattttattccgaaacaaggttttaatctccttcaggatgtccaggtattg
tgtcctatgcaacggggaataattggtgctcgtaatttgaatgcggtggtgcaatctata
gtagtttcaaataaagctgagacgctaaacgccacagtaagaacggataatttcatcaag
agacgtgtcaataggagcgtacattctagctcgtttcaaggcactaaagtcatgctcaat
atcatttaa
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