Thiobacillus denitrificans: Tbd_0620
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Entry
Tbd_0620 CDS
T00275
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd00540
Lipopolysaccharide biosynthesis
tbd01100
Metabolic pathways
tbd01250
Biosynthesis of nucleotide sugars
Module
tbd_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Tbd_0620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tbd01005
]
Tbd_0620
Enzymes [BR:
tbd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Tbd_0620
Lipopolysaccharide biosynthesis proteins [BR:
tbd01005
]
Lipid A
Tbd_0620
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
AAZ96573
UniProt:
Q3SL44
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All DBs
Position
652259..653101
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AA seq
280 aa
AA seq
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MKLCHFEAGLDQPLFLISGPCVIESEQLAMDTAGQLKEMCAGLGIPFIYKSSFDKANRSS
TKSFRGLGLEEGLRILADVKAKIGVPVLTDVHEDTPLDEVAAVVDVLQTPAFLCRQTNFI
QNVARAGRPVNIKKGQFLAPWDMQNVVDKAREVGNDQIMVCERGVSFGYNTLVSDMRGLA
IMRGTGCPVVFDATHSVQQPGGQGATSGGQREFVPVLARAAVASGVAGVFAETHPDPACA
LSDGPNAWPLGMMRELLETLKEIDALVKQRGFIEHKLMKA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtgtcatttcgaggcgggcctcgaccagccgctgttcctgatctcgggccct
tgcgtgatcgaatccgagcagctcgcgatggacaccgccggccagctgaaggaaatgtgc
gccgggctcggcattccgttcatctacaaatcgtcgttcgacaaggccaatcgctcgtcg
acgaagtcttttcgcggcctcggcctggaagaagggctgcgcatcctggcggacgtgaag
gcgaagatcggcgtgcccgtgctgaccgacgtgcacgaggacacgccgctcgacgaggtg
gcggccgtggtcgacgtgctgcagaccccggccttcctgtgccggcagacgaatttcatt
cagaacgtcgcccgcgcggggcgtcccgtcaacatcaagaagggccagttcctcgcgccg
tgggacatgcagaacgtcgtcgacaaggcgcgcgaggtcggcaacgaccagatcatggtg
tgcgagcgcggcgtctccttcggctataacacgctggtgtccgacatgcgcggcctcgcg
atcatgcgcggcacggggtgcccggtggtgttcgacgcgacgcattcggtgcagcagccg
ggcggccagggcgcgacgagcggcgggcagcgcgagttcgttccggtgctcgcgcgcgcg
gcggtcgcgagcggcgttgccggggtgttcgccgagacgcatccggacccggcgtgcgcc
ctgtccgacggcccgaacgcgtggccgctcggcatgatgcgcgaactgctggaaaccttg
aaggaaatcgacgcgctggtgaaacagcgcgggtttattgaacacaagctgatgaaggct
tga
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