KEGG   Thermobispora bispora: Tbis_2991Help
Entry
Tbis_2991         CDS       T01236                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tbi  Thermobispora bispora
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tbi00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Tbis_2991
Enzymes [BR:tbi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Tbis_2991
DNA repair and recombination proteins [BR:tbi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Tbis_2991
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
3515756..3516637
Genome map
AA seq 293 aa AA seqDB search
MTANVRVRVDGRDLALSNLDKVLYPDTGFTKAEVIDYYARIAPVMLPHLRDRPLTVTRYP
DGAGGEGFYEKNAPAHTPDWVRTVTLPAKGSTKQRDRIDFALVNDLPTLVYYANLAALEI
HVPMWRVGADGTPLPPDTLVFDLDPGAPATIVDCCRVALLLRDALAGDGLTGCVKTSGKK
GIQVYVPWERGHGTAEYARRLARTLEAEHPFVTSVMAKRARPGKVFIDWSQNNPAKTTIA
PYSLRAGRLPTVSTPVRWAEVEACDSPDALTFTASDVLERVAEHGDLFQPGRA
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgacggcgaacgtgcgggtacgggtggacggccgtgacctcgccctgagcaacctggac
aaggtcctctaccccgacaccggcttcaccaaggcggaggtcatcgactactacgccagg
atcgcgccggtgatgctcccgcacctgcgggaccggccgctcaccgtcacgcgctacccg
gacggcgccggcggggagggcttctacgagaagaacgcccccgcgcacacccccgactgg
gtccgtaccgtgaccctcccggccaagggcagcaccaaacagcgcgaccggatcgacttc
gcgctcgtcaacgatctgcccaccctggtctactacgccaacctggccgcgctggagatc
cacgtcccgatgtggcgggtcggcgcggacggcacgccgctccccccggacacgctcgtc
ttcgacctcgaccccggcgccccggccacgatcgtcgactgctgccgggtcgccctgctg
ctccgcgacgcgctcgccggcgacggcctgaccggctgcgtgaagaccagcgggaagaag
ggcatccaggtttacgttccatgggagcgcgggcacggcaccgccgagtacgcccggcgg
ctcgccagaacgctcgaggcggagcaccccttcgtgacgagcgtgatggcgaaacgggcc
cggccggggaaggtgttcatcgactggagccagaacaacccggcgaagaccaccatcgcc
ccgtactcgctgcgggccggccggctgcccacggtctccacgccggtgcggtgggcggag
gtcgaggcgtgcgacagcccggacgcgctcacgttcaccgcctccgacgtgctggaacgc
gtggccgagcacggtgatctgttccagccgggccgtgcttag

DBGET integrated database retrieval system