Thiolapillus brandeum: TBH_C0873
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Entry
TBH_C0873 CDS
T03600
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TBH_C0873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbn03400
]
TBH_C0873
DNA repair and recombination proteins [BR:
tbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TBH_C0873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_2
HHH_5
HHH
IMS_HHH
5_3_exonuc
Sey1_3HB
Motif
Other DBs
NCBI-ProteinID:
BAO43807
UniProt:
A0A7U6JHI3
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Position
954204..956024
Genome browser
AA seq
606 aa
AA seq
DB search
MSYKTEFDYKAFLKTLTHRPGVYRMLDQEGKILYVGKAKDLRRRVSSYFQRAGNKRIQTM
VAQIRDIQIVVTHTEAEALLLENNLIKELKPRYNILLRDDKSYPYIYLSDDEFPRISFYR
GARKGKGRYFGPYPSGGAVRETLYLLQKLFPVRQCENSYYSNRSRACLQYQIKRCTAPCV
GLVSREDYMRDVQDIVLFLEGKTHDVVDGLVARMESASADLAFEEAARYRDQIDAIRKVQ
ERQYVSGEKGDLDIVACARAEGQACVQVFFIRQGRNLGNRQFFPKGARGRVEGEILSAFL
GQYYPGRQLPTEILLSHKPEDRELLQEALSQQAGRKLVLRTAPRGERARWLKMARQNAEI
ALKARLAGSSNARLRLETLQEALGLEEPPSRMECFDISHTGGERTVASCVVFNAEGPLKS
DYRRFNIDAITPGDDYAAMAQALRRRYTRIMSGEGRLPDILFIDGGRGQLSTAAQILEDL
GVHGVLLVGVAKGPERRAGMEQLFLLEHQHPLILDAHSPALHLVQHIRDEAHRFAITGHR
QRRNKARKRSVLEDIPGIGQKRRQQLLKQFGGMQGLSRAGIEDIATVDGISTRLAEKIYQ
AFHGTE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacaagactgagttcgactacaaggcgtttctcaagaccctgacccacaggccg
ggggtgtatcgcatgctcgatcaggagggaaagatactctacgtcggcaaggccaaggat
ctcaggcgccgggtgagcagctatttccagcgggcgggcaacaaacgcatccagaccatg
gtggcacagatccgggatatccagatcgtcgtcacccacacggaagccgaagcgctgctc
ctggagaacaatctcatcaaggagctcaagcctcgctacaacattctgttgcgggacgac
aagagctatccctatatctatctttccgacgatgagtttccgcgcatcagtttctaccgg
ggggcgcgcaagggcaagggacgttacttcggcccctatcccagtggtggggcggtgcgt
gagaccttgtatctgctgcaaaaactgtttcctgtgcgccagtgcgagaacagctactac
agcaaccgctcccgggcctgtctgcaatatcagatcaaacgctgcaccgcgccctgtgtg
ggcctggtgagccgggaggactacatgcgcgatgtgcaggacatcgtcctgttcctggaa
ggcaagacccatgacgtggtggatggcctggtggcgcgcatggaatctgcttccgcggat
ctggcattcgaggaagcggcccgttaccgggatcagatcgacgccatccgcaaggttcag
gagcgccagtacgtcagtggcgagaaaggcgatctggatatcgttgcctgtgccagggcc
gagggccaggcctgcgtacaggtgttcttcatccgccagggacgcaacctgggcaaccgg
caattctttcccaagggcgccaggggccgggtcgaaggcgagatcctgtcagcatttctg
gggcagtattatcctggccggcaactgccgacggaaattctgctcagccacaagccggaa
gacagggagctgttgcaggaggccctgtcccaacaggcagggcgcaagctggttctgcgc
accgccccccggggggagcgggcccgctggctgaagatggcccggcagaacgccgagatt
gccctcaaggcgcgcctggccggtagcagcaatgcccgcctgcgcctggagaccctgcag
gaagctctgggcctggaggaaccgccttcgcgcatggagtgtttcgatatcagccatacc
ggaggcgagcgcaccgtggcgtcctgcgtggtgttcaatgccgaaggccccttgaagagc
gactaccggcgcttcaatatcgacgccattacccccggggacgactacgcggccatggcc
caggccctgcgccggagatatacgcgcatcatgtccggggaagggcgtctgccggatatc
ctgttcatcgacggtggcagggggcagctgtctacggctgcgcagattctcgaagacctg
ggcgtgcatggtgtcttgttggtgggggtcgccaagggaccggagcggcgtgcaggcatg
gaacaacttttcttgttggaacatcagcacccccttatacttgatgcacattctcccgct
ttgcacctggtgcagcatatccgggacgaggcgcatcgtttcgccattaccgggcaccgg
cagaggcgcaacaaggcgcgcaagcgctcggtgctggaagatatacccggcatcgggcag
aagcgccgccaacagctgctcaagcagtttggaggcatgcagggcctgtcacgggcgggg
atagaggatatcgccaccgtggatggcatcagcacccggttggcggaaaagatttatcag
gcatttcatggaactgaataa
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