Trypanosoma brucei brucei: Tb11.01.0340 Help Entry Tb11.01.0340      CDS       T01013                                  Name (RefSeq) RAD50 DNA repair-like protein   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism tbr  Trypanosoma brucei brucei Pathway tbr03440   Homologous recombination tbr03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:tbr00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     Tb11.01.0340    03450 Non-homologous end-joining     Tb11.01.0340  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tbr03032]     Tb11.01.0340    03400 DNA repair and recombination proteins [BR:tbr03400]     Tb11.01.0340 DNA replication proteins [BR:tbr03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     Tb11.01.0340 DNA repair and recombination proteins [BR:tbr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      Tb11.01.0340     BRCA1-C complex      Tb11.01.0340    NHEJ (non-homologous end-joining)     MRX complex      Tb11.01.0340 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_21 SbcC_Walker_B AAA_15 AAA_29 Rad50_zn_hook ABC_tran nSTAND3 AAA_27 AAA_22 AAA_16 RsgA_GTPase Motif Other DBs NCBI-GeneID:  3665902 NCBI-ProteinID:  XP_828895 UniProt:  Q384J8 LinkDB All DBs Position 11 Genome browser AA seq 1349 aa AA seqDB search MTSIEQIEISGVRSFDPNPNNRQRIVFKKPLTVILGKNGAGKTTIIEALLNACTGQMPPG GGTEKSSFVYDPKVVGENDVKAQIRLLFTGRGGKVMQVIRSFQATRTRNKTTFATLDNIV AFQDSATGKIISSTYRANDVDRAIPDMLGVSPAVLEHVIFCHQEDGNWPLSPPKEVKKIF DDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEHREQARQISADITVKEETVAG IKAKTDALAPQLQELQAIATALDNVEHRAEGLSREAAVIEGRIGEKRESLSRLNVSPPGY SLGELLQRRQNFGEKLRELESTVSTKKELMERAVAELRRCEESVVSLRSGIEFREKQEQQ HKRECEELKVIMSDLSMKFVIDGEINEHCLTKITEYVNEELHNEEQKRSGELNSIDAGIR AVEDRRSTTLRAMDTEGKEKEMKEEQLRHLMKRCGDAKEALGKLAPYVTPTRLKNVQDTI TELEKRVEAMELLQKGDARYRQRQDILQSVEAQNKVVAQLRQELSRHKQRSGREAEMNLL RTQIAEKEEIINNRLQEELIAGLNDLGCNTGGSQTLTTVTMQIDKLRRKMADTLYSVEAE ANDLDRQLIALKQNRSQLEGKIVSENIELQRKRVQCISKLGNDDALTNFEALLVEARDRY HKLNEKLSGSKALAACHAHFVEQAKVEDKCPLCGRAFGSENELNDFLASFKVGQQTSGKD SIKEGDVEKALQRVRGLEQLESDVMDVRRLADNAPQLEESLKSTIKQIRDKEILLEDVHN KRDKVKDEMQRAQKLVQAAMEVNAMTSEKQALLQQLNRREAACAEASTSSANIGGAGEPC CAGELASLSYEELSDKYESANAELHRLNVLLSEMQRGEEGGSAQALVKELTMKRSELCEL KMKLTRQAEVEATIAQYAEQEEGYVSRIAEIDDQREKLVAQLESYNKELEALHAKRKELE LASQQGYIGQLKRTLGLLSAVLPRLRDYITSRVGEELSRDRESLCVNEKRRDTQAEEVKL LRLSIDDTLRIINEEQRLRVEVDKYIEYLEKKGSIEEDEKRLSDVRCTLSELKVNAVPAA EAVLGKDVVERESVGRIRELIRGKISALECLRAQQDGVAEAMRQDIESLKGQLTRDKYKD IEKRYRTTFLKVQTTEIAVSDVEKYYRALEKAVQTYHQEKIAQINQILADLWRHTYKGSD IDTIELRSEDDVTSTTARRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAF CCDCGILALDEPTTNLDEDNARSLAESLRMLIDSHRAVKHFQLIVITHDEHFVRALGGQA LDTFYYIHKDREGAFSVIEERTFDQLFAS NT seq 4050 nt NT seq  +upstreamnt  +downstreamnt atgacgagtatcgaacagattgaaatcagcggagtgcgcagcttcgaccctaatccaaat aaccgtcagcgcattgtctttaagaagccactcactgttattctcggaaagaatggtgct ggaaagacaactattattgaggcacttctgaacgcctgcacgggtcaaatgcctcctggt ggtggaacagaaaagagttcgtttgtgtacgacccaaaggttgtgggtgagaatgatgtg aaggctcagatccgccttcttttcacgggaaggggtgggaaagttatgcaggttattcgc tcgtttcaggctacacggacgcggaataaaaccaccttcgcgacgctcgataacattgtc gccttccaagattctgcgacggggaaaatcatatccagcacatatcgcgccaatgacgtg gaccgcgcgattccagacatgcttggtgtatctcctgcggtattggagcacgtcatattc tgccaccaggaggatggaaattggcccctctcccccccgaaggaagtgaagaagatattt gacgatatatttgcagccacgcgttatgttcttgccctcgaccgtttgcgggagaataat aaggaactgcgccgccagcagaaggaacatgaggcgagcttaatgtcattgtcagagcac agagagcaggcacgccaaatatcggcggatattacagttaaggaggagactgtcgcaggt attaaagcaaaaacggatgcgctggcaccccaattgcaggaactgcaagccatcgctact gctctagataacgtggagcatcgtgctgaaggtttatctcgagaagcagctgtcattgaa ggtcgaataggcgaaaagagggagtctctcagccggttaaacgtttccccgcccggatac tcactgggggagttactgcaacgcaggcagaacttcggtgaaaagttgagggaactggaa tccactgtttcgacaaagaaggagcttatggaacgggcggtggcggagcttcgccgttgt gaagaaagtgttgtgagcctccgctccggtattgagtttcgtgagaaacaggaacagcag cacaagagggaatgcgaggaactcaaggtaataatgagtgatttgtctatgaaatttgtc atcgatggggagatcaatgagcattgtttgacaaagataacggaatatgttaatgaggaa cttcacaacgaagagcaaaagcgaagtggagagctaaattccatagatgcaggaattcgt gctgtagaggatagaaggtccacaacacttcgtgcgatggacaccgaaggtaaggagaag gaaatgaaagaggagcagctccgtcatctgatgaagagatgtggcgacgcaaaggaggca ctcggtaagttggctccgtacgttacccctacacgtctgaagaatgtgcaggacacgatt accgagttggaaaaacgtgttgaggcaatggagctgctgcaaaagggtgacgcgaggtac aggcagcgacaggacatcttacagagtgttgaggcacaaaataaggttgtcgctcagttg cgacaagaactgtcccgacacaagcagcgctcaggtcgtgaggcagagatgaatctcctt cgtacccagattgcggaaaaggaggaaattatcaacaaccgactgcaggaagagctaatt gcaggactcaatgaccttggctgcaatacaggcggatcgcagaccctcacaactgtaacg atgcaaatcgacaaactgaggcgcaagatggcagacacgctttatagcgtcgaagcagag gccaatgaccttgatcgccagttgattgcactgaaacagaaccggtcgcagttggagggg aaaattgtcagcgagaatatagagctacagaggaagagggttcaatgtatcagcaaactt ggaaatgatgatgccctaactaactttgaggcgcttctagtggaggcgcgtgacagatat cacaaattgaatgagaagcttagtggatctaaagcattggccgcatgtcacgcccacttt gtggagcaggctaaggttgaggacaagtgcccactctgtggtcgtgcttttggcagtgag aatgagttgaatgacttcttggcatcctttaaggtgggtcaacaaacctctgggaaggat agcataaaagagggtgacgttgagaaggctctgcaacgcgtgcgcggactcgagcagttg gagtctgatgtaatggacgtgaggcggcttgccgataatgcaccacaactggaggagtca cttaaatctacgattaagcagattcgagacaaagaaattctcctggaggatgtgcacaac aaacgagacaaagtgaaggacgaaatgcagcgtgcgcaaaaactggttcaggctgcgatg gaggtgaatgccatgacatctgagaagcaggcactactgcagcagcttaacagacgagag gcagcatgtgcagaggcgagcacatcttccgctaacattgggggtgcaggggagccttgc tgtgcgggtgaattagcgtcactttcgtacgaggagctgtcggacaagtacgagtccgca aatgctgaacttcaccggttgaatgtgcttctaagtgaaatgcagagaggggaagaggga ggctctgcccaagcacttgtcaaggagcttacaatgaagcggtcggaactctgtgaattg aaaatgaagcttactcgtcaagccgaggttgaggcaacgattgctcaatatgcggagcag gaggaaggttacgtcagccgtattgctgaaatagacgaccaacgggaaaaactggtggcc caacttgaatcttacaataaggagttggaagcactgcatgcaaagcggaaggagcttgag ttggcgtctcaacagggatacattggtcagctaaaaagaacactaggacttctttcggct gtgctaccgaggctgcgggattacatcacttcaagggttggcgaagagctctcaagagac agagagagcttgtgtgtgaatgaaaaacgacgagacacgcaagctgaagaggtcaagctt ctccgcttatcaattgacgacacattgcgtataatcaatgaagagcagcggctcagagtg gaagtggacaagtacattgagtatctcgagaaaaagggttccatagaggaagatgaaaaa cgtttgagtgatgttaggtgcaccctttctgagttgaaagtaaatgctgtgcccgctgca gaagccgtcctcggaaaggatgttgtggagagggaaagtgttggccgaattcgtgagctt attcgcgggaaaatcagtgcgttggagtgccttcgtgctcagcaagatggtgtcgccgag gcgatgcgacaggacattgagagtctcaaaggtcagcttactcgcgataagtacaaagat attgaaaagcgctaccgcacgaccttcctgaaggtccagactactgaaattgcggtttcg gatgtggaaaaatattatcgagcgctggaaaaggcagtgcagacctaccaccaagagaag attgcgcagatcaatcaaatcttggctgacctttggcgacacacctacaagggaagcgat attgacaccattgaactccgttccgaggatgatgtcacgtcaactacagcgaggcggagt tacagctatcgtgtggtgatgaaacgggggaacagtgaaatggacatgcggggccgttgc agtgcgggtcaaaaggtacttgcctctgttctcatccgacttgcgctaagtgaagccttt tgttgtgactgcggaattcttgcattagatgagccgacaacgaatcttgacgaagataac gcgcgttctcttgcggagtcgctacgcatgcttattgacagtcatcgagcagtgaaacat tttcagcttattgtcattactcacgatgagcacttcgtccgcgcgctaggaggccaggca ctggatactttttattacattcataaggatagagagggcgccttttctgtgattgaggag cgcactttcgatcagttgttcgcgagttga

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