Trypanosoma brucei brucei: Tb11.03.0450
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Entry
Tb11.03.0450 CDS
T01013
Name
(RefSeq) RNA polymerase I second largest subunit
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tb11.03.0450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb11.03.0450
Enzymes [BR:
tbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tb11.03.0450
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Tb11.03.0450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
Motif
Other DBs
NCBI-GeneID:
3665527
NCBI-ProteinID:
XP_828155
UniProt:
Q387I8
LinkDB
All DBs
Position
11
Genome browser
AA seq
1596 aa
AA seq
DB search
MSTKNSVVGSASGSHASTAGETVTSTRSGTSSRHSRQRRQQYDYVKNPSEPMTAMERLKL
VRCSIARLRYLGERHRHTSKLDTTGGDRLLSFFEGLRKRVLKLEYNPRVVAKSKVGAPKH
LDYIRGHANALLGEASTIISECEQAMDRSEAVYEGLAYHQLQDTHRELENLVGLLSGAPS
DMESAGSLKLLADLVSPHVAEFDAFAEQRVPEFLQELKNEGFLFSSVINDSQQPANAIGL
LSVFIVDVAIGVRPGRSARLVIQHALHNLARLKSRVDKADLTLGAEEDSSNNEHHRMQSL
EFEVIRGRLREAKEELERIRDKWDHDEGDIFSRAGTGVQGLQSIIDAKRVKESTVIEEAQ
AIHDRTVYACLPFASPQYCRIRSETYSQPCHVRVGFKFVAKGDGSVSRTKTQLIYNLMPE
FLILMRQQGIAPSDQERFATLAPSKYELWLSLGELPEMVLGARCALRGVNQRLDHFRALE
EQKEVGGYFVLRGGERILRNLILQRCNVPLNIERERFATVDSFFSPRAVIIRCKRPSGLT
VQNYFYYATKGEVIFTFARRVVWNIPALLVLSALNTRHRTSLDIYKLLTIGLTNGRSPHA
ARVEALLQHHSQMPYSTLDNFLDYLAVVGLMYRRYHESSFIFRFLPQYHTSFATQHDAWY
GLFMLRRHMLPHLNTAEATPDLPPTATSREIREWLSTGLQEELAAKFDALIGILRQLLVF
NDGATGNQGNDVLAYQEVFTVSQVLIGAFEVSLMKTMGAVTFRMAGQLSPEIFQATMCLA
ETPIREAANTLEKLNQLLEYSCRNNGPDPLITLNRLLLTGNFALDREEDFYSPQTAGWAV
MTEHLNFYRSFEQLMCVHRGKSIAEMRSSDVRRYPCEAYGFICMVHSPDGEDCGVLNHLS
ISTVLSASPRVGSSQYKILLAFIEEELKNVRNTTSLISCVDQLVGTVPVWLEGRLLGYLS
PNEALSASKALTQKKALRSRGVVGVTGIVRRDSISSLNTMEVVYIPPGSKDPMGLYIFYQ
YGRLMRPVLQIESPSRGGDLPFPVVYLGTWEQSWRDIAAVPSDLFDGFDQLRRKYEFMEQ
NGFNILSFTSSTIPFFEHNCSPRNLFQCGLSKQTAGTQLQTQAWRRDAKLFRMYYPQRYI
SRTLPMDYFGLDDVSLGVNAVVAILAYTGYDLDDAMILNSTAKQFGMLNAGVTVAKIVKA
SGKGDSNDVFVFHNCLPDGQPFTPELDRHGLPKKRAVPNATAYFSFDTDHKYPSLRDSSA
VYCCAKRFEYIDPLTNEKTYEYTRHQITKWRHFDKGEDAWVHSVIPLTYDGPDPTSVLVL
FRIPRPPVIGDKFSSRHGQKGTLPLDIRSHDLPFSTRDGITPDIIINPHAFPSRMTVGMV
LEMMGAKLGCIQGRLCDHSAWSVIDEQPRSAKTIGDALEALGYNRYGREKLIDGITGEEI
EAEVLVGISGYQRLRHMVSDKWQARARTDSHTHRAVTKTGQPVKGRKRHGGVRVGEMERD
ALLSHGVAEVVIDRLLHVSDKTKAFICVECGSMLSIYERHATEYSTWKTCKFCSAGLHET
DDTIAFVEIPQVLRLWATELTSVGIRVVLKTSETSL
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaagaattccgttgtaggttcggcttccgggtcgcatgcgtcaaccgcgggt
gagacagtaacatcaacccgcagtgggacatcctctcggcattctaggcagagacggcag
cagtacgattacgtgaagaatccttcggaaccaatgaccgcaatggagaggctcaaactt
gtgcgctgctccatagcgcggctgcgctatcttggtgagcgccatcgtcacacgtcgaag
ctcgacacaaccggtggtgaccggctgctgagtttcttcgagggactacgcaagcgagta
ctgaagcttgagtacaacccccgtgtagtcgcaaaatccaaagtcggtgcaccaaagcac
cttgattatatcagagggcacgcgaatgctcttctgggagaggcatcgaccattatttcc
gaatgtgaacaagcgatggaccgaagcgaagctgtgtacgagggtcttgcgtatcaccag
ctccaagatacacatcgcgagttggagaacttagtagggttgctatctggtgcgccatca
gatatggagagcgctggatctttgaaactacttgctgacctggtttctcctcatgtggcc
gaatttgatgcctttgcagagcagcgcgtgccagagtttttacaagaattgaaaaacgag
ggtttccttttctcttcagtaataaatgattctcaacaacctgccaatgcgattggactt
ctgtcagtgttcattgtcgatgtcgccatcggagttcgacctgggcgttctgctaggttg
gtgattcagcatgcccttcacaacttggccaggctcaagtctcgtgttgacaaagccgat
ctaacccttggggcggaggaagacagtagcaataacgaacatcacaggatgcagtctctc
gaattcgaggttattcgtggccgtttaagagaagctaaggaggaattggaaagaataagg
gataagtgggatcacgacgaaggggatatattctcacgcgccggtactggggttcaaggt
ttgcagtcaattattgatgcaaagcgagtgaaggagtcgacggtgattgaggaggcgcaa
gcaatacatgatcgaacagtttatgcgtgccttccttttgcgtctccgcaatactgtcgc
attcggagtgagacatattcccaaccttgccatgtgcgggtgggttttaagttcgttgcc
aagggagatggatcagtctctcgaacgaagacgcagttgatatataatcttatgccagaa
ttcttgattctcatgcgccaacaagggattgccccttctgatcaagagcgttttgccacc
cttgcacccagtaagtacgagttgtggttatccctgggagagttaccggagatggtattg
ggtgctcgctgcgccctccgcggtgtgaaccagcgacttgatcactttcgtgccttagag
gagcaaaaggaggtaggcggttatttcgttttgcgcggtggtgagcgtattctacggaac
ctcattctacagcgctgcaatgttcctcttaatatcgagcgtgagcggtttgcgaccgtg
gattctttcttttctccgagggcggtaattatccgttgcaagcgtccgagtggtttaacc
gtccaaaactacttctactatgcaaccaagggtgaggtgatctttaccttcgcacggagg
gtcgtgtggaatatcccggccctattggtattatctgccctgaacacccggcatcggact
tcgctggatatatacaagcttcttaccattggcctcaccaacggtagaagccctcatgct
gcgcgtgtggaggcacttttgcagcaccatagccagatgccgtacagtactctcgacaat
ttcctggattatttagcggtcgtgggtctgatgtacagacggtaccacgagtcatccttt
atctttcggtttctcccgcagtatcacacttcttttgccactcagcacgacgcctggtat
ggtttgttcatgctgcgacgacatatgttgccgcacttgaatactgctgaggctacgccg
gatttgccgcctacagccacctcacgagagatcagggagtggctttccactggactccag
gaggagctagctgcgaagttcgatgcattaattggtatcttgcgtcagctgttggttttt
aatgacggtgcaacgggtaaccaggggaacgacgtgctcgcttatcaggaggtgttcacg
gtttcgcaagtgctaataggtgctttcgaggtgtcattgatgaaaaccatgggggcagtg
acctttcgtatggcaggtcaactttcccctgagatatttcaagccactatgtgcttggca
gaaactccaatacgagaagccgccaatacccttgagaagctgaatcagttactggaatac
agctgtcgtaacaatggacctgatccacttattacactcaatcggttgcttcttacggga
aactttgcccttgaccgtgaagaagatttttattctccccaaaccgctggctgggcagtt
atgacggaacacttaaacttctatcgctcctttgagcagctcatgtgcgtacatcgtggt
aaatcgatcgcagaaatgcgttcgagtgatgtgcgcaggtacccatgcgaggcttacggg
tttatatgcatggttcatagccccgatggcgaggattgcggtgtcttaaatcacctgagt
ataagcacggttctttctgcctctcctcgagttgggtcaagccagtacaaaattctcctg
gctttcattgaggaagagctaaagaatgttaggaataccacatcactgatttcctgtgtg
gatcagctggtcggtaccgttcctgtgtggttggaaggaaggctgctgggttacctctca
cctaacgaggctctgagtgcctccaaagctctcacacagaagaaggcattacgaagccgg
ggagttgtgggtgtcacaggtatcgtgaggcgcgacagtataagttctctaaacactatg
gaggttgtctacataccgcctgggagcaaggatccaatggggttgtacatattttaccag
tacggaagactcatgcgcccggtgctgcaaattgagtcgccgtctcgcggcggcgacctt
ccatttcctgtcgtttacctaggtacttgggagcagtcgtggagggacattgctgccgtc
ccctccgacctttttgatggttttgaccaactgagacgcaagtacgagtttatggaacaa
aacgggttcaacatattgagcttcacttcctcgacgattccattctttgaacataactgt
tctccccgtaacctttttcagtgtggattgtcaaaacagacggctggtacacaactccaa
actcaggcatggcgacgggatgcgaagctcttccgcatgtactatccccaacgttatatt
agtcgtacactcccgatggattactttggcctagatgacgtaagcttgggagttaatgcg
gtggttgccatccttgcctacacaggctatgatttggacgatgccatgatactaaacagc
acagcgaaacaatttggtatgcttaatgctggtgttaccgttgcaaagatcgtaaaagcc
agtgggaaaggagacagcaacgatgtcttcgtgtttcacaactgtcttccagatgggcag
cccttcacaccggagttggatcgtcacggccttccgaaaaagcgtgcagtgcccaatgca
acggcgtatttctcgtttgataccgatcacaaatatccgtcgttgagggatagcagtgca
gtgtattgttgtgccaagcgctttgagtacatcgacccattaaccaatgagaagacttat
gaatacacacgtcaccaaataacgaagtggaggcactttgacaaaggtgaggatgcatgg
gtccacagcgtcattccactaacatatgacggaccggaccccaccagtgtgctggttttg
ttccgtatcccgcgcccgcctgttatcggtgacaaattttcctcgcgccatggacagaag
gggacacttccccttgacatacgctctcacgatttaccgttcagcacacgtgatggtatt
acgcctgacattattatcaaccctcatgctttcccctcccgcatgacagtaggcatggtg
ctggagatgatgggtgcgaagctgggctgtatccaaggtcggttgtgcgatcatagtgca
tggagtgttattgatgagcagccccgatccgctaaaacgattggcgacgcccttgaggca
ctcggttacaaccgatatggccgtgagaaacttatagatggcataactggggaggaaatc
gaagctgaagtattggtaggcatctcgggataccagcgcttgcggcacatggtaagtgac
aagtggcaggcgcgggccaggacagattcccacactcatcgagcagtgacgaaaacaggg
caaccagtgaagggacgtaagcgccacggtggcgtccgcgtcggtgagatggagcgtgac
gcgttgctttcccacggtgtggctgaggtcgttatcgacaggctgcttcatgtgtccgat
aaaacgaaggcttttatttgtgttgagtgcggctctatgctgtccatttacgaacgacac
gcaacagaatattcaacgtggaaaacgtgcaaattctgcagtgcaggtctgcacgagaca
gatgacacaatagctttcgttgagatcccgcaggtgcttcgtctctgggcaacggagctt
acaagcgtcggcattcgagttgtgctgaagaccagtgaaacatccttgtaa
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integrated database retrieval system
