Tribolium castaneum (red flour beetle): 654988
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Entry
654988 CDS
T01046
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tca04121
]
654988
Enzymes [BR:
tca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
654988
Ubiquitin system [BR:
tca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
654988
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
654988
NCBI-ProteinID:
XP_008193384
UniProt:
D6W6U2
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Position
LGX:2555675..2589211
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AA seq
679 aa
AA seq
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MDFIILKVNGTDVSSFPHEDAVRAFLTAQEPIVVEVKRRISESPQEKTPTSKLISTGCQT
ELSGLTWLEDNSLDCLTHDIDLEEVTLRKCSSDEKLGLTVCYSSGSEADTCTEVYIRDIA
PQSVADRDGRLRQGDQILQVNGKDVANKEETESLFAENRKAVTLLVSRCYNRSEEYLDAE
PIDAISPGGRSAAYQNSLIEQLVQQQTESQHSPRNDTAPKVPPHFIQDRLNLTNSLVRSK
MDSINHEISELDHRMQNIQLVKIDKRKPPQLPHIPAPQESDTEHIYETIPESVDSEMEPI
YSCPYEADEQSMVEQWLKLQDQGWNPQNKDATPKDNKKQRCKSSKSNSSGEEHENSSSAY
NTGGSCNSNPLTFELACSQDSKQKDTYRSTLILCPPVEKEDTSKEKDQTETCDACKQQAT
SKKKSKSTSKTNSPSSPTTRIGVGATPAHLLSDTMYTNVANLQQTMLLQQQLFRQALVQN
NIDIASKPTTSFTSPSLSQYQFVSSSQTYTTQPETATLETMMEWKVKRRPDGTRYIARRP
VRNRILKNRAIKISEERAGLTTEDDTVSELKIGRYWTKEERKKHLEKSKERKQRQEILLA
SRNIEENGELVIHKPVEKVHSFSSKKAANNLDNTVKKHKSKRAHKEGYDNFPTVQEMIVH
GPKVPTNGKMMGLLSVTTV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcatactcaaggtcaatgggactgacgtaagcagcttcccacacgaagat
gcagttagagcatttctcaccgcacaagaacctattgttgttgaagttaagagaagaata
tcggagtcgccacaagaaaaaactcccacttctaaactgatctcaacaggttgccaaaca
gaactttcgggattgacatggctggaagataactctttggactgtttgacacacgatata
gacttggaggaagtgacgttacgaaaatgtagtagcgacgagaagttaggtttaacagtt
tgctacagctccggttctgaagctgacacttgcacggaagtgtatattagagatatagcg
ccccaaagtgttgccgacagggatggcagattacgacaaggcgatcaaattttacaagtc
aatggaaaagacgtcgctaataaagaagaaactgaatccctcttcgctgaaaatagaaaa
gccgtcacattattggttagcagatgctataacaggagcgaagaatacttggatgccgaa
ccgatcgacgctatttcaccaggaggtcgcagtgccgcctaccaaaacagtcttatagaa
caattagtacaacagcagacagaatcacagcattcccctagaaacgacacagcccccaaa
gttcctcctcacttcatccaagaccgacttaatctcaccaatagtttagtacgttcgaaa
atggactcaataaatcacgaaatttccgagttagaccaccgcatgcaaaacatccagtta
gtaaaaatcgacaagcggaaacctccgcagttaccacacatcccagcacctcaagaatcc
gacacggaacacatatatgaaacgatcccagagtcggtagattccgaaatggaacccatc
tattcttgcccatacgaagccgacgaacaaagcatggtggaacaatggctgaaactgcaa
gaccaaggatggaacccgcaaaataaagacgcaacacccaaagataataagaaacaaagg
tgcaagtcatcgaagagcaacagcagtggtgaggaacatgaaaatagctccagtgcttat
aacacgggaggatcttgtaacagtaatcctttaactttcgagctagcctgtagccaggat
tcgaaacaaaaggatacctatagatccacgttaattttgtgtccccccgtggagaaggaa
gacacctcgaaggaaaaagaccagacggaaacgtgcgatgcgtgcaaacagcaagcaacc
tccaaaaagaaatctaagtcaacgtcaaaaacgaatagcccgtcttctcccacgactaga
ataggagttggagcaactccagcgcatctgctctctgacaccatgtacacaaacgtagct
aatttgcaacaaactatgctcctgcagcagcaactgtttagacaagctttagttcaaaat
aatattgacatagcgtcgaaacctacgacaagcttcacatccccgagcttaagtcagtac
caattcgtcagtagctcacagacttacaccacccaacccgagactgccactttagaaaca
atgatggaatggaaggtcaagcgcagacctgacggtaccaggtatatagcgcggcggccg
gttcggaataggatacttaaaaatagagcgatcaaaatatcggaagaaagggcgggatta
acgacggaagacgacactgtgtcggaactcaaaattgggcggtactggacgaaggaggag
cgcaaaaaacatttagaaaagtcgaaggagaggaagcagaggcaggagatattgctagcg
tcgaggaacatcgaggaaaacggcgaattagttatacataaaccggtcgagaaagttcac
tcgttttcgtcgaagaaagccgcgaacaatttagataatactgtgaaaaaacataaaagc
aaacgggcccacaaagaaggatatgataattttccaacagtgcaagaaatgattgtccac
ggacccaaagtccccaccaacggcaagatgatgggactgctctccgtgacaacggtttaa
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