Tribolium castaneum (red flour beetle): 656122
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Entry
656122 CDS
T01046
Name
(RefSeq) RING finger protein nhl-1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
656122
04121 Ubiquitin system [BR:
tca04121
]
656122
Enzymes [BR:
tca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
656122
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
656122
Ubiquitin system [BR:
tca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
656122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
Phytase-like
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Baculo_PEP_C
DUF4449
Dynamin_M
HC2
DUF1664
zf-B_box
Motif
Other DBs
NCBI-GeneID:
656122
NCBI-ProteinID:
XP_008197968
UniProt:
A0A139WBE6
LinkDB
All DBs
Position
LG9:10877089..10889219
Genome browser
AA seq
1235 aa
AA seq
DB search
MEQFEQLLTCAICLDRYRNPKLLPCQHSFCMEPCLEGLVDYVRRQVKCPECRAEHRIPYQ
GVQGFPTNVTLQRFLELHIEITGELPDPTSGQVMERCNVCSEKAYCSFCSHCDKKICEEC
KGAHMEILRREISRINNQIRRGIHRLQDTLSLVEKNTQSIQSNCSSVSEEVEEIYRRLSK
ALKDRTEYLRGEIDRYLGTELRSLTNLKENLEQEISNILSNCDLADKHMNENVDIWDDCE
LMDAKEIFLKTVEFIRNFEYENTDYSRKIRLVLAHDPNQLVLHVAGYGDLNIANQHFSQG
SGMLQPPGPGLMRSKSDHRLASQFRQQEERGYERGYGGDQDEALLGGRKFGERPKTERYG
DRYRGTDYGEDYDNDSRPARSRYSRFRRHGQDNDSDGEQPGRGVRFEPQKVEREKVLDTE
DVARGPLSGITRLADSPRVMKKLQENESGKKKEKEAPPPPAPQPKVVPKRPPPPTNRQVS
EEDEIAKIKKQNKGATTSTETETRPERTEERHSAQRKTPAPEAISSPEESDESLTSLQQT
QRKTAASKTGARRASDAGHKKSTRSASSDSNTSTESTASSNAIRTTGAPFTTEEVKQKYL
SRGSVDATPRTPTKEPTKPFQSRFLHNKTTTPPSATKDDDETETSSEEETESEEESDEDT
KKPDTKEMAKTDIGPLLARSAHARDGSAENARKSSRDETSTYTRPRYGVPKEESPPRSRY
ARRTSGAQDEEPPRYGYTSRFLNKSKSSAAIPPEEDDHKYSSTLGDDSDSKYGSGRSRYM
ALKERRQRLARSRSSQQFGDEEDVDEPISPTSCNPSAYLASRGYGSAASSGHDLARSRSS
HALKSRDNSPDRSNATEKDGAALSSWARYLKNKYGNRNSGKDKESSSSVTPSSSSTTARR
LSLGLPLRSSTELGSSDDDQKNMQGSPTTPPTAATAAAGIAVAVAGTSPRSQYLQKCQQL
FEIGSRGSEAGCFTWPRGVAVGPDNSIVVADSSNHRVQVFDSNGRFLKEFGQYGNGEGEF
DCLAGVAVNRIGQFIIADRYNHRIQVFDPSGRFLRAFGSQGTADGRFNYPWGITTDALGF
IYVCDKENHRVQVFQSDGTFVGKFGSMGSKEGQLEHPHYIAVSNTNRVVVSDSNNHRIQI
FDVNGKVLSSFGSEGSDDGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPDGTFLRSFGC
WGIGKGEFKGLEGVAMTPNGHILVCDRENHRIQVF
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattcgagcaacttttaacatgtgccatttgtctggaccgctaccgcaacccc
aagctgttgccatgccagcacagcttctgcatggaaccatgtctggagggcttggtggat
tacgtccggagacaggtgaagtgtccggaatgccgagcggaacaccgcatcccctatcag
ggggtgcagggtttcccgaccaacgtcacccttcaaagattcctggagcttcatattgaa
ataactggcgaactcccggatccaacaagtggccaagttatggaacgatgtaacgtttgc
tcagaaaaggcgtattgtagtttttgttcccactgtgataagaaaatctgtgaagaatgc
aagggagcgcacatggaaatcctccggcgggagatctcccggattaacaaccagatccgg
cgaggcattcataggttacaagacactttgtctctagtcgagaaaaacacccaaagtatt
caatcgaactgctcgtcggtgagcgaagaagtcgaggagatttaccggaggctctccaaa
gccctcaaagaccggacggaatatttacgaggcgagatcgatcgctatttaggaacggaa
ttaaggagtttgaccaacttgaaggagaacttggagcaagagatatccaacattttgagc
aactgcgacctggccgacaagcacatgaacgagaacgtggacatttgggacgactgcgag
ctcatggacgccaaagaaatcttcctcaagacagtcgaattcatccggaacttcgaatac
gaaaacacggattacagcaggaaaattcggctggttttagcgcacgacccaaatcaactc
gtcctgcacgtcgccggctacggcgatctaaacatagccaatcagcactttagtcaaggc
tcgggcatgttgcaacctccaggaccgggcttaatgcggtccaaaagcgaccaccggcta
gcctcacagttcaggcagcaggaggaaagagggtatgagagaggttacggcggcgaccaa
gacgaggcgctcctcggaggccgcaaattcggcgaaaggcccaaaacggagagatacggt
gacagataccgtggcactgactacggcgaagactacgataacgactccagaccggctagg
tctaggtacagccgcttcaggaggcacggccaagataacgactccgacggggagcaaccg
ggtcgtggagtcagattcgaaccgcagaaggttgagcgggagaaggtcctggacacggaa
gacgtggccagaggccccttgagcggcatcacccgcctggctgactcgccccgcgtcatg
aaaaagctccaagagaacgaaagcggcaaaaagaaggaaaaggaggctcctccaccaccc
gccccccagccaaaagtcgtaccaaagcggcccccgccccccacaaacagacaagtaagc
gaagaagacgagatcgctaaaataaagaaacagaataaaggtgccaccacctccaccgaa
acagagacccggccagagcgcaccgaagaaagacactcagctcagagaaaaacccccgcc
cccgaggccatctccagccctgaagaatccgacgaatctctcacttccttgcaacaaaca
cagcgcaaaaccgccgccagtaaaacaggcgcgagacgcgcctccgacgctggacataaa
aaatccacgcgatcggcgagctccgactcgaacacttccacagaatccacagcttcctca
aacgccattcgcacaaccggggccccgttcaccaccgaagaagtcaaacagaagtatctc
tcacgcgggagtgtcgacgccactccccgaaccccaaccaaagaaccaaccaaaccgttc
caaagccgcttcctccacaacaaaaccacgacaccgccatccgccaccaaagacgacgac
gagaccgaaaccagttcggaggaggagacggaaagtgaggaggaatccgacgaggacacc
aaaaaaccagacaccaaagaaatggcgaagactgacattggcccccttttggcccgcagc
gcgcacgcgagggacgggagcgccgaaaacgcccggaaaagcagccgggacgaaacctcc
acgtacaccagacccaggtacggggtcccgaaggaggaatcgcccccgcggtcgcgctac
gcccggcgaacctcaggggcgcaagacgaggagccccccaggtacggctacacgagccgc
ttcctcaacaagagcaaaagctcggctgccatcccgcctgaagaagacgaccacaagtac
agttcgacgcttggcgacgactccgacagtaaatatgggagcgggcggtcgcgctacatg
gccctgaaggagcggagacagaggctggcgcgcagtcggagcagtcagcagtttggcgac
gaagaggacgtcgatgagcccatctcgccgacgtcctgcaacccgtccgcgtacttggcg
tcgcgggggtacggctccgcagcatcgtcagggcacgatcttgcgagaagtcgctcctcg
catgcgttgaagtcgcgcgataattcgcctgataggtcgaacgcgacggagaaagatggg
gccgcgttgagttcttgggcgaggtatttaaagaacaagtacgggaataggaacagtggc
aaagataaggaatcgagtagttcggtgacaccgtcgagtagttcgacgacggcgaggaga
ctgtctcttggtctcccgctgaggtcgtccacggagttagggagctcggacgacgaccaa
aaaaacatgcaaggctcccccactacccctcctacagcagctacggcggcagccggtatc
gcagtggcagtggcaggtacctcccctaggagtcagtacttgcagaaatgccaacagctg
ttcgaaattggtagtcgggggagcgaagccggatgtttcacctggcctcgcggcgttgcc
gtgggccccgataactccatcgtagtcgcggattcctccaaccaccgcgtccaagtcttc
gactcaaacggacgattcctgaaagaatttggacaatacggcaacggcgaaggcgaattc
gactgtcttgcaggcgttgccgtcaacagaattggccaatttatcatcgccgaccggtac
aaccaccgaatccaagtcttcgacccttcgggacgcttcttgcgagccttcggcagccag
ggcaccgccgacggccgcttcaactacccgtggggcatcaccaccgacgccctaggcttc
atctacgtgtgtgacaaggaaaaccacagagtgcaggttttccagtccgatggtaccttc
gtgggcaagttcggctccatgggcagcaaggagggccaactggagcatccccactacatc
gccgtttctaacacgaacagggtcgttgtttcggactcgaacaaccaccgaatccagata
tttgacgtgaatggcaaagtcctgtcctccttcgggtccgagggctcggacgatggtcag
ttcaagttccccagaggcgttgctgtggatgaccaaggctacatttgcgttgctgattcc
ggaaataacagaatccagattttccaccccgatggaacatttttgcgttcattcggttgt
tggggcatcggcaaaggcgagttcaagggccttgaaggtgtcgcaatgacccccaatgga
cacatactggtgtgtgatcgagaaaaccacaggatacaagtgttttaa
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integrated database retrieval system
