Theobroma cacao (cacao): 18591651
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Entry
18591651 CDS
T02994
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18591651
Enzymes [BR:
tcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
18591651
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18591651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
18591651
NCBI-ProteinID:
XP_007017946
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All DBs
Position
8:complement(2441763..2445643)
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AA seq
549 aa
AA seq
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MSNDTEPAQVSSVAAESHAGDCDAEMQLLEGAVRPLPYHVVKELLSVGVCARCVLRLFGI
EEHIYCHSSFSQSMLGSILEEETSFKSEVEFQFCSVCLGVLQFSYCDDGEETVVKKESAK
DMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLLSHMKKKYESEPWFQERLLLSKC
HSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRASKKVQNSVERNQECKRRKTGT
ENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQDQETSEHFESPIEKVSEPCHLV
YVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVEEIIGSNILPICQGDNYKFHAA
GREDIDVRMLGSGRPFLLEIQNARQVPSELIVKEMESKINGLENKLVGVKNLKVVGSQGW
ALMHEGEAEKQKQYCALVWISRPLEDEDMQTISLLNDMKILQRTPIRVLHRRSPLEREKI
IHWMKIERIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSVGSILGCRAEILQLDVTD
VKMDCFVTE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgataccgaacccgcgcaggttagctcagtagcagcggagagccacgccggt
gactgcgacgctgagatgcagcttctcgaaggcgccgttcggcccttgccttatcatgtc
gtcaaggaacttttgtctgtcggggtttgtgcgagatgcgtccttcggctatttggtatc
gaggagcatatttattgtcattcctcgttttcacaatcgatgctcggctcaattctagaa
gaagaaacttcttttaaatcagaagttgagtttcaattctgcagcgtatgcttaggtgta
ttgcagttcagttattgcgatgatggcgaagaaacggtggtaaaaaaggagagtgcaaag
gacatggctttaagcattgcggagttagtgaagcaagaagggcatcaaattgatggattc
tcgctagaagtttctgttccaccgcttatcttggaaaacgaatcttcgcttttgtcacat
atgaaaaagaaatatgaatcagagccttggtttcaagaaaggttgttgctttccaaatgc
cattctgttaaggatgttctgaaatttgctataacaaaaccccttgaaacattgttgggt
gttaaagctagtgcaagctcctttcgaattcgtttgacttacactcacaaaagggcatca
aaaaaggttcagaactctgttgagaggaatcaggaatgcaaaaggcgaaaaacaggcact
gagaatgcgttgcacaatgttaatgatgaatcggtgattgctgacaaagattgttctggt
tattctaccattgaaacaaattctgtcactggaatattttccaatggcgtgcaagatcaa
gaaacttctgaacactttgaatcccccatagagaaggtcagtgaaccttgccacttggta
tacgtttgctgcaggacacatatttacctatgtggtcgatatctgaagtactcaagaaat
gtgagtcaaacacgctggataattgatgaggaaaggatgggagaggcatctgttgaggag
ataataggtagcaacattcttcctatatgtcagggagataattacaagtttcatgctgct
ggcagagaagatattgatgttcggatgttgggttcaggtaggccttttctgcttgagata
caaaatgcccgccaagtcccatcagagctgattgttaaggaaatggaatcaaagataaat
ggcttggagaataaattagttggagttaaaaatcttaaagtggttggcagccagggttgg
gcactgatgcatgaaggagaagctgagaagcagaagcaatattgtgcattagtgtggatt
tctcgtccgcttgaggatgaagacatgcaaaccatatctttgctcaatgacatgaaaatt
ctgcaaaggaccccaatacgggtgcttcaccgtcgaagtccattggaacgtgagaaaatt
atacattggatgaagattgagaggattgctggaagctctcaatattttcttttgcatctc
tgcacccaggctggaacttatattaaggaatttgttcacggtgatcttgggcgtacacag
ccaagtgttggatcaattctaggatgcagagcagagatactgcagctggatgttacagac
gtgaaaatggattgttttgtgactgaatga
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