Thiomicrospira cyclica: Thicy_0883
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Entry
Thicy_0883 CDS
T01517
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thicy_0883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_0883
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thicy_0883
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thicy_0883
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
RecO_N_2
DUF3818
Motif
Other DBs
NCBI-ProteinID:
AEG31655
UniProt:
F6DCR9
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Position
complement(1040212..1041024)
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AA seq
270 aa
AA seq
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MSVIQQPAYVLHTRPYKETSLQVTLLMPQQGKRFATFRGVRQASKAARQKQAWLQPFQPL
QVAWQASPSNQDWLMPSHLEAYGQVHWLSGEANLCGLYLNELLYNSLPLAQPCETLFVVY
IETLQALSNQAKMDKISPATLNRAQQAWWLRRFEWYLLQELGYPLHTWLTEQTYGFVAGA
AIDPQRPYRLRPQTLPELADHQAEVWDLPGAALLALLDEQAGSAGQIDLRLLAALKRVFR
AHLDLFLAGRPLGSRQLLQTFLTTAKDTSS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcattcaacagccggcctatgtattacacacgcggccttataaggagaccagt
ttacaggtcactttattgatgcctcaacagggcaagcggtttgccacttttcggggcgtg
cgccaagcgtctaaagccgcgcgccaaaagcaggcctggttacagccgtttcagccgttg
caggtggcgtggcaagcaagtccatccaaccaggactggttaatgcctagccatttggag
gcttatggtcaggtgcattggctgagtggtgaagccaatttgtgtggtttgtatcttaat
gagttgttatataactctttgccactggcgcaaccttgcgaaaccctgtttgtggtctat
atcgaaaccttacaggcgctgagtaatcaagccaaaatggataagatcagcccagcgacc
ttgaatcgcgcccagcaggcctggtggttacgtcgttttgagtggtatttattacaagag
ctgggttatcccttacacacttggttgactgagcaaacgtatggctttgtagcgggtgcg
gcgattgacccgcaacgcccgtatcgattacgtccgcagaccttacccgagcttgctgat
catcaagcggaagtttgggatttgcctggagccgcgttgcttgctttattagatgagcag
gcgggtagtgctgggcagatagatttgcgcttgcttgccgcgctgaaacgagtgtttcgt
gcccatctggatctttttttagccggacgcccgcttgggagtcggcagttattacaaacc
tttttaacgactgcaaaggatacgtcctcatga
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