Tenacibaculum dicentrarchi: AUW17_11925
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Entry
AUW17_11925 CDS
T04208
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tdi
Tenacibaculum dicentrarchi
Pathway
tdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AUW17_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdi03400
]
AUW17_11925
DNA repair and recombination proteins [BR:
tdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AUW17_11925
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AUW17_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
ALU75913
LinkDB
All DBs
Position
complement(2742683..2743414)
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AA seq
243 aa
AA seq
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MALITTKAIVLRAIKYGDTSLIVTCFTLESGIVSYLIRGVLKSRKGLLKKAYFEPLTQLL
IQAKHHQNRTEKVLNSIKEAGVIHPYSNIHTSVVKQSIVLFLSEILTNIIKEEEKNDVLY
QYIETSLIWLDTHSDVANFHLLFLLNLSRFLGFYPDVSQANKPAFSLSEGRFTTATYEKL
VLTGNELLLFKKLLGINFDTIHTISYHKNERQTILGVIIQYFELHLEGFKKPKSLAILET
VFS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcattaattactacaaaagcaattgttttgagggcgattaaatatggcgataccagt
ttaattgtaacttgttttactttagaaagcggcattgtttcttaccttattcgaggtgtt
ttaaaatcaagaaaaggactgcttaaaaaagcctattttgagccattaacacagttgctt
attcaggcaaagcatcatcaaaataggactgaaaaggtgttaaactctataaaagaagca
ggggttattcatccttatagcaatattcatacttcggttgttaagcagtctatcgtactt
tttttatcagaaatattaacaaatattattaaagaagaagaaaaaaatgacgttttatac
cagtatatagaaacgagtttaatttggttagatacgcatagtgatgttgcgaattttcac
ttattatttttgttgaatttatcaaggtttttagggttttatcctgatgtttctcaagcg
aataaacctgcttttagtttatccgaaggaagatttacaacagcaacctatgaaaaatta
gtacttacaggaaatgaattactgctttttaaaaagctgttaggtataaattttgatact
atacacactatttcgtaccataaaaacgaaaggcagaccatccttggggttataattcaa
tattttgaattacatttggagggttttaaaaagccaaaatcattagctattttagaaacc
gtgtttagttga
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