Trichodesmium erythraeum: Tery_4426
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Entry
Tery_4426 CDS
T00387
Name
(GenBank) RNA polymerase, sigma 28 subunit
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ter03021
]
Tery_4426
Transcription machinery [BR:
ter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tery_4426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HNH_repeat
ARMH4
Motif
Other DBs
NCBI-ProteinID:
ABG53414
CyanoBase:
Tery_4426
UniProt:
Q10WG0
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Position
complement(6821260..6822414)
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AA seq
384 aa
AA seq
DB search
MKILLPNNSGKHQISSPDSNNKSDMADQMKQISLIVAESLHKETQNQENSSMNISATTIP
VSENQQDIDDAVGALFKQMSRYPLLNQKEEIELAKLIQELVVFEKLPEKLANDLGRTPTK
SEVAVAAGFTESQLDHRLHQCRTAKRRMISSNLRLVVSIAKRYLNRGVPFLDLIQEGALG
LNRAAEKFDPDKGYKFSTYAYWWIRQGITRTIANQGRTIRLPVHVVEQINKLRRVYRDLR
RSLNRIPNDTEIAQELEISLPQLRNLQQIRRKTLSLNHRLGTDENTELLDFLEDNENSTP
EAQMNDMMMRQDILEVLNHVLSNREQDVISLRYGLITGEPHTLDEVSRMINLSRERVRQI
QAKAMRKLRRPQVAERLKGWLNRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacttcccaataattcaggtaagcatcaaatctcatcaccagactccaat
aataaatcagacatggcagatcagatgaaacaaatcagtttgatcgttgccgaatctcta
cataaagaaactcaaaatcaggagaattctagtatgaatatatcagctacaaccattcca
gtctcagaaaatcaacaagatatagatgatgcagtaggagcattatttaagcaaatgtct
cgttatcctcttctgaatcaaaaagaagaaatagaattagcgaagttaattcaagagtta
gtagtatttgaaaaactgccagagaaactggcaaatgacttaggacgaacacctacaaaa
tctgaagtagcagtcgcagcaggtttcacagaatcacaactagatcatcgcttacatcag
tgtcgaacagccaaacgtcgaatgattagttctaacctgcgtctagtagtttcaattgcc
aagcgttatctaaaccgtggggtaccttttctagatttgattcaagaaggagcattagga
ttaaatcgcgccgctgaaaaatttgatccagataagggctataagttttctacttatgcc
tattggtggattcgtcaaggaataacccgcaccattgctaaccaaggacgtactattcgt
ctaccagttcatgtagttgaacaaattaacaaacttagacgagtttaccgcgacctaaga
cggagtttaaatcgtattcccaatgacacagaaattgctcaagaactagaaatttctctc
ccacaactgcgcaacctacagcaaattcgtcggaaaactctctctctgaatcatcgttta
ggtactgacgaaaatactgaactgttagatttcttagaagataatgaaaatagtactcca
gaagcacaaatgaatgatatgatgatgcgccaggatatcttggaggtattaaatcatgta
ttaagcaatcgtgagcaagatgtcatcagtctccgctatggtttaatcacaggagaacct
catactttggatgaagttagtcggatgattaatctttctcgggaacgagtacgacaaatt
caagctaaagcaatgcgaaagttacgtcgccctcaagtggctgaacgtttaaaaggatgg
ttgaatcgtttttaa
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