KEGG   Tessaracoccus flavus: RPIT_05425Help
Entry
RPIT_05425        CDS       T04688                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tfl  Tessaracoccus flavus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tfl00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    RPIT_05425
Enzymes [BR:tfl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RPIT_05425
DNA repair and recombination proteins [BR:tfl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RPIT_05425
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1189351..1190292)
Genome map
AA seq 313 aa AA seqDB search
MSERIATEVDGVQLSLSNLDQPLFPNGFTKGELISYYLEIAEVMLPHLSDRAITRVRFPD
GAGAPSFYEKNAPAGTPEWVRTVDVATSSGPISYVTARQRADLVWLANLRAIELHTPQWR
FVDATQGDGGVILDGPDEPRATTLIIDLDPGPGITPEDSARGAIIAATTLAELGLEAFPK
TSGNKGLQLSVPIQPTPASEVYSFAQALARHLTAAHPKLFVATMSKDARGGLIFVDFAQN
YAARNTVTAYSVRGLDTPSVATPLTWDEVAALQPDSTLRTSPAKVMARVQDLGDLWQAQE
PTSSSPSLPAPPS
NT seq 942 nt NT seq  +upstreamnt  +downstreamnt
atgagtgaacggatcgccaccgaggtcgacggcgtgcagctgagcctcagcaacctcgac
cagccactgttccccaacggcttcaccaaaggtgaactgatctcgtactacctcgagatc
gccgaggtgatgctcccgcatctgagcgaccgggcgatcacgcgggtgcgcttccccgac
ggtgcaggcgcgccgtccttctacgagaagaacgctcccgccggcaccccggagtgggtc
cgcacagtggatgtggccacgtcgtcggggcccatcagctacgtcaccgcacgccagcgg
gccgacctcgtgtggctcgccaacctgcgggcgatcgagctgcacacaccgcagtggcgc
ttcgtggacgcgacgcagggagatggcggggtgatcctggacggccccgacgagcctcgc
gccacgacgctcatcatcgatctcgacccgggtcccggcatcaccccagaggactcggcg
aggggcgcgatcatcgcagcgacgacgttggccgagctggggctcgaggcgttccccaag
acgtccggcaacaagggcctccaactcagcgtcccgatccagccgacgccggcctccgag
gtctactccttcgcgcaggcgctggccaggcacctcactgccgcccaccccaagctgttc
gtggccaccatgagcaaggacgcgcgtgggggcctcatcttcgtcgacttcgcccagaac
tacgcggcacgcaacaccgtgacggcctactcggtccgcgggctggacacaccgtcggtc
gccacgccgctcacctgggacgaagtggccgccctccagccggattcgaccctgcggacc
agccccgccaaggtcatggcccgcgtgcaggaccttggcgacctgtggcaggctcaggaa
cccacgtcgtcgagcccgtcgctcccggcgccgccctcgtga

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