Thermococcus gammatolerans: TGAM_1558
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Entry
TGAM_1558 CDS
T00920
Symbol
trmB-2
Name
(GenBank) Transcription regulator, TrmB-like protein (TrmB)
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tga03000
]
TGAM_1558 (trmB-2)
Transcription factors [BR:
tga03000
]
Prokaryotic type
Helix-turn-helix
Other families
TGAM_1558 (trmB-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR
HTH_24
HTH_IclR
MarR_2
HTH_9
Nop5_N
Motif
Other DBs
NCBI-ProteinID:
ACS34060
UniProt:
C5A748
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All DBs
Position
complement(1464078..1465094)
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AA seq
338 aa
AA seq
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MEEKEIKARLKEFGLNEYEVRAYLTLIKNGALTAGELATLSKVPQPRIYDVIRTLMAKGF
VTTSQSRPKQVIPLSPDSVMDALKRRYNERIDELKSALEKLYTPKGEIGSVTVVKSRITF
EEHVRKAIERARFHLSIAVPREFLRKIEGPLTTKKEEGVRINLFVYGCDEIPPIASEIRV
REVPDPIIIIQDREEGVYLPYEALTSSSSLLGYGLIIRDNNILFMIDRYFYHALWPTGRV
VYREERKLKLPREYIHIRELVEDIKTFNLTGSKVEIIGKFVRSKKPVHIVGRVVGFFEDE
NKVISNITVETEEGAKYVVGGWNASLEDIEAERIVLLE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaggagataaaagcccggctaaaggagttcggtctcaatgagtatgaggtc
agggcgtatcttacactcataaagaacggagcgctgacggcaggagagctcgcgacgctc
tcgaaggtgccccagccgagaatatatgacgtgataaggacactcatggccaagggattc
gtcacgacgagccagagcaggcccaaacaggtaatccccctcagccctgatagcgtcatg
gacgctttgaagaggcgctacaatgagcggattgacgagctcaagagcgctttggagaag
ctctacactccaaaaggagagatcggaagcgtaactgtcgttaagagcaggataacattc
gaagagcacgtgagaaaagccattgagagagctcggtttcatctaagtattgccgtcccc
agggaattcctcaggaaaatcgaggggcccctcaccaccaaaaaggaggagggagtaagg
ataaacctcttcgtttacggttgtgatgagatcccgccgatagccagtgaaataagggtg
agggaagtccccgatcccataattatcatccaagaccgggaagagggagtttacctaccc
tacgaggcgctgacctcaagcagttcactgctcggctatggactcatcataagggacaac
aacatactctttatgatagaccgctacttctatcatgccctctggccgacgggaagggta
gtttatcgcgaggagcgcaaactcaagctcccgcgggagtacatccacataagggagctg
gtggaggacataaagaccttcaatctaacgggatcaaaggtcgagattattgggaagttt
gttcgctccaagaaacctgtacacatcgtgggtagggtggtggggttttttgaggatgag
aacaaagttatttccaatatcacagtagagaccgaagagggggccaagtacgttgtcggt
ggctggaacgcgtcacttgaggatattgaagccgagaggatagtactccttgagtga
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