Taeniopygia guttata (zebra finch): 100219193 Help Entry 100219193         CDS       T01082                                  Symbol PCDH15 Name (RefSeq) protocadherin-15 isoform X1   KO K16500   protocadherin-15 Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tgu03037]     100219193 (PCDH15)    04515 Cell adhesion molecules [BR:tgu04515]     100219193 (PCDH15) Cilium and associated proteins [BR:tgu03037]  Primary cilia and associated proteins   USH complex and associated proteins    100219193 (PCDH15) Cell adhesion molecules [BR:tgu04515]  Cadherins   Protocadherins    100219193 (PCDH15) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin ECD Cadherin_2 RET_CLD1 Motif Other DBs NCBI-GeneID:  100219193 NCBI-ProteinID:  XP_030131608 LinkDB All DBs Position 6:complement(4134623..4758973) Genome browser AA seq 1718 aa AA seqDB search MLQQLCLWKWFTVGTALAAVLAWALAQNDEDWQYEDCKLARTGPPATIVPIDEESRNGTI LVDNMLIKGTAGGPDPTIELSLKDNVDYWVILDPIKQTLYLNSTGRVLDRDPPVSIQSIV VQVQCVNKKVGTIINHEVRIVVRDRNDNSPQFQQQRYYVAVNELTPVGTTIFTGFSGNNG AIDIDDGPNGQIEYVIQYNPNDKTSNRTFDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN DRAQNLNERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCRPLTYQASLPELTDPAHV NPISVSPPIQAIDQDRNIQPPSERPGILYSILVGTPEDYPQYFHMNLTTAELTLLKPINR DLHQKFDLVIKAEQDNGHPLPAFANLHIEILDENNQKPYFTRSTYEGFILESSPVGTTIS DNQNLTSPLQLVVLDNDVEETKDPQLHLFLNDYTTFFTVTQSGITRYLTLLQPVDREVQQ LYTFSMTASDGVQESVPVTVNILVIDANDNSPTFSNISYSVKIYTDMKPGEGVIKLTAVD ADEGANGQIVYEILAGDQGDFTINKHTGLITISPGVLLAVGRSYALTVRASDSAPPAQRR SSITTVYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAVLLNLQAFDREGDPIKYLIQNG DPQQVFNLSQSSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGP VFDMFLPKNLSVQEEEANAFVGQVRATDADAGVNGQVHYSLANFNNLFRITSNGSIYTAV KLNREVRDYYELIVEATDGAVDPRRSTLTLAIKVLDIDDNSPVFTNASYTVCVPENLPPG TVFLQLEAKDVDLGADVNYRIRTEEARQYFALNRHTGELSLRKSLDYESFSDTEATFTFL VEAFDSKGTMPPGLATVTVRVKDMNDYSPEFSQKLYRGMVAPDAVKGTVITTVSAEDRDP PGTPASLVRYKVDVVQFPYSASIFDVEENSGRVVTRVNLNEEPSTVFKLVVIAYDDGDPV KFNTTTVEIAVLQPSVIPRFTQDEYRPPPVSESAPKGTVVTVVTAAALNQTVVYSIVSGN EEDVFAINNRTGVISVKKPLDYERVQSYELRVQADSLQVVRSNLRVPSKSNTAKVFIEVK DENDHAPVFTKKMYIGGVSEDARMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGF VIEAYTGLIKTAMLFKNMRRSYFKFQVIATDDYGKGLSSKAEVLVSVVNQLDMQVIVSNV PPTLVEQNKDQLIGILERYVQDQIPGATVVVESIGARRFGDGYSEEDYTKSDLMVYAIDP QTNRAIMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEG ALLALAVIIILCCMPAILIVMVSYRQFKERQAECAKTARIQMALPAGKPAGAAANNLYEE LGDSTMRGYAQQEQQQLLRPSLLRPEELSMESGIDPGQEYYGQDYYSYEHGYELPQYGSR RRLLSPSGMYDEYGEVVVESDGGYYYSPHGPAAEEWAKKKRIKLVVDPEYETSSTGEESA PDSSQRNRLSNAGFQPNGSSNVYVAQNGSVVRTRRACLGNNLKVTSPVRLGKQFKKLDKL AVTHEESVPLNTLSKGPSLSDKMNSRPCSVSFSSTIGAENVVTKAGAAKLKSTDEQESVV DHEEVKEPLESHSEHTQSDEEELWMGPWNNLHIPMTKL NT seq 5157 nt NT seq  +upstreamnt  +downstreamnt atgctccagcagctttgtctctggaaatggttcacagtggggacggcactcgctgctgtc ctggcctgggctctggcccagaatgatgaagactggcaatatgaggattgcaagttggcc agaacaggtcctccagccacaatagttcccattgatgaggagagtcgcaacggcactatc ctggttgacaacatgctgatcaaagggacagcaggagggcctgaccccaccatcgagctc tccctgaaggacaacgtggattactgggtgatcctggaccccatcaagcagaccttgtac ctgaacagcactggccgtgtgctggacagagatccgcccgtgtccatccagtccatcgtg gtgcaggtgcagtgtgtgaacaagaaggtgggcaccatcatcaaccacgaggtgcgcatc gtggtgcgcgaccgcaacgacaactccccgcagttccagcagcagcgctactacgtggcc gtcaacgagttaactccagttggaacaaccatcttcacgggattttctggaaacaatggt gctattgacattgatgacggtcccaatggccagatagaatatgtcatccagtacaatcct aatgacaagacttccaacaggacctttgatattcctctcactttgtctggagcagtagtt ctgagggaaagactaaattatgaagaaaagactcgttactttgtcattgttcaagcaaat gaccgagcccaaaacctgaacgagcggaggacgagcacgaccaccctgaccgtggacgtg cttgatggggacgatttgggaccaatgttccttccctgtgtgctggtgaacaacacccgg gactgcagacccctcacctaccaagccagcctacctgagctgacagaccctgcccatgtg aatcccatcagtgtctctccacccatccaagccatagatcaggaccgaaacatccagcct ccttccgagagacccggcatcctctactccatcctcgttggtactcctgaggattatccc cagtatttccatatgaatctcacaacggctgaactgacgctcctcaagccaataaatagg gatttacaccagaaatttgacttggttattaaggctgaacaagacaatggccatcctctc cctgcctttgccaatctccacatcgagatcctggatgagaacaaccagaagccttacttc acaaggtctacctacgagggcttcatcctggaatcctccccggtgggaacgaccatctcg gacaaccagaacctgacctcccctctgcagctcgtggtgctggacaacgacgtggaagag accaaggatccacagctccatctcttcctgaacgactacaccacgtttttcactgtgact cagagtggcatcacccgctacctcaccctgctgcagcctgtggacagggaggtccagcag ctctacaccttctctatgacagcttctgatggagtccaggagagtgtcccagtgactgtc aacatcctggtgatcgatgcaaatgataattccccaaccttctccaacatttcctacagt gtcaagatctatacggatatgaagcctggggaaggtgtcataaagctgacggccgtggat gctgacgagggagccaacgggcagattgtgtacgaaatcctggctggggaccagggagac ttcaccatcaacaagcacacggggctgatcaccatctctccaggagtgctgctggcagtg gggcgctcctacgccctcaccgtcagagcatcggacagtgctccccctgcacagagaagg agctccatcaccactgtttacatcgaggtgctgcctcccaacaaccagagccctccgcgc ttcccacagctgatgtacagcctggaagtcagcgaggccatgcggatcggtgccgttctc ttaaacctgcaggctttcgatagagagggtgaccccatcaaatacctcattcagaatgga gatcctcaacaagtttttaatctctctcaaagctctggcctgctggccttgggaaagccc ctggacagagagagcactgaccgctacatcctcatcgtcacggcctcggacggcagaccc gacgggacttcgactgctactgtcaatattgtggtgacagatgtcaatgacaacggacca gtttttgacatgtttctccccaaaaacctctctgtgcaggaagaggaagccaatgctttt gttggtcaagtaagggctacagatgcagatgctggggttaatggacaggtccattacagt ctggccaacttcaacaacctcttccggatcacctccaacggcagcatttacacggcagtg aaactgaacagggaggtgagggattactacgagctcatcgtggaggcgaccgacggagct gtggacccccggcgctccacgctcaccttggccatcaaggtgctggatattgatgacaac agccccgtgttcaccaacgcctcctacacggtctgtgtgccagagaatctcccaccagga actgtcttcctgcagctggaggccaaggacgtggacctgggtgcagatgtgaactatcgg atccgcacggaggaagcccggcagtattttgccctgaacaggcacacgggagagctgtcg ctccggaaatccttggattatgaatccttctctgacacagaggcaaccttcaccttcctc gtggaagcctttgacagcaagggcacgatgcctcctgggctggccactgtcactgtcaga gtcaaggatatgaatgattactctccagagttcagccagaagctttacaggggaatggtt gctcctgatgcagtcaagggcaccgtcatcaccacggtctcagctgaggatcgggatccc ccgggcaccccagcgagtctggttcgctacaaggtggatgttgtgcagtttccctacagt gccagcatttttgacgtggaggaaaactccggacgtgtcgtcacccgagtgaacctcaat gaagagcccagcacagtgttcaagctggtggtcattgcctatgatgatggggacccagtg aagttcaacaccaccacggtggaaattgcggtgctgcagccctcagtcatcccacgcttc acacaggatgaatacaggcctcccccagtgagtgaaagtgccccgaagggaaccgtggtc accgttgtcaccgcggccgccttgaaccagacagtcgtgtactctattgtgtcagggaat gaagaggatgtgtttgccattaacaacagaacaggagtgatctctgtgaaaaagcctctg gactatgaacgtgtccaaagctatgagctccgagtgcaggcagactccctgcaggtggtg aggtccaacctgcgtgtcccctccaaaagtaatacagccaaggtctttattgaggtgaag gatgaaaatgaccatgcacctgtttttaccaaaaaaatgtacattggaggggtgtctgaa gatgccagaatgttttcttctgtgcttaaagtgaaggctgatgataaggacactgggaat tacagtgccatgcaatacaggctcatcattccccccatcaaggatggcaaggaaggcttt gtgatcgaggcttacacagggctgatcaaaactgccatgctcttcaaaaacatgaggaga tcctatttcaagttccaggtcattgccactgacgattacggcaaaggactgagcagcaaa gcagaagtgctcgtctctgtggtcaatcagttggacatgcaagtgattgtctccaacgtt cctcccacccttgtggagcaaaacaaagaccaactcattgggattttggaacgctacgtc caagaccagattccgggggcgacggtggtggtggaatccatcggagcacggaggtttggg gatggatattctgaggaggattacaccaagtccgacctcatggtctatgccatcgaccca caaaccaacagagccatcatgaggaacgaactttttaagttcctggatggcaaactgctg gatatcaacaaggagttccagccctacctgggccagggtgggcgaatcctggagatccgc acgccggacgtggtggccaacgtgaagaagcaggcgcaggccgtgggctacacggagggg gcactgctggccctggctgtcatcatcatcctctgctgcatgccagccatccttatcgtc atggtcagctaccggcaattcaaagagcgacaggctgagtgtgccaagactgcgaggatc cagatggctctgccagcaggaaaaccggccggagccgcggccaacaacctctacgaggag cttggagacagcaccatgcgaggatatgcacagcaagagcaacagcagttgctgagacct tctcttctcagaccagaggagttgagtatggagtctggaattgatccagggcaggaatac tatggccaggattactacagttatgagcacgggtacgagctgccgcagtacgggagccgc cggcgcctgctgtccccatcgggaatgtacgatgagtacggcgaggtcgtggtggagagc gacggtggctactactacagtccccacgggccagcagctgaggagtgggccaaaaagaag aggatcaagttggtggtggacccagagtatgagaccagctccacgggcgaggagagcgct cccgactccagccagaggaaccggctgagcaatgccggcttccaacccaacggcagcagc aacgtctacgtggcccagaacggctccgtggtccgcacccgccgcgcctgcctgggcaat aatttaaaagtcacgtccccagtgaggctggggaagcagttcaagaaactggacaagctg gcggtgacgcacgaggagagcgtcccgctgaacacgttgtccaagggaccatccctgagt gacaaaatgaactccaggccgtgcagtgtctccttttcctctactataggggccgaaaat gtagtgacaaaggccggggcggccaaactgaaaagcacagacgagcaggaatcagttgtt gaccacgaggaagtcaaggagcccttggagtcgcacagtgaacacacacagtctgacgag gaggagctctggatgggcccttggaacaacctccacataccaatgacaaaactgtga

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