Taeniopygia guttata (zebra finch): 100220022
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Entry
100220022 CDS
T01082
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100220022 (UBR1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100220022 (UBR1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
100220022 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
100220022
NCBI-ProteinID:
XP_030131348
Ensembl:
ENSTGUG00000011165
LinkDB
All DBs
Position
5:complement(26297855..26355497)
Genome browser
AA seq
1755 aa
AA seq
DB search
MADGADRGPAAGGRAAAQAPERAMWCDERFDFQAAFLQCLAKHVPNIYSAEMDPLVEKQE
EMVQAAILYPLECYLFGEDPDIFLEKLQQSGTSQLCGKVFKGGETTYSCRDCAVDPTCVL
CIDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASTSPKENSECQLN
EEIMEHSRRVFPSVIKYIVDMLIWEEEKELPVELTISREKVDSYYCVLFNDEHHSYDHVI
YSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYASCQEAKEEIKRHSENVSQRPLHVEV
LHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFISKLMLWDARL
HKGARKVLHELIFSSFFMEMEYKKLFAVEFVKYYKALQKEYISDDHDRVLSVTALSVQMF
TVPTLARLLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYSVIYDLRYI
LVSKPTVWTDRLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEAAIAIQMQL
KNILLMFQEWCACDEELLLRSYRECHKAVMRCSTNGRSREKTVFHLCGHTLESRPYRVSA
DPVSIHLPLSRTLAGLHVRLSKTGAISRLHEFVSPEEFQVELLVEYPLRCLVLVAQVAAE
MWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQRYELVDAFK
KMKPTKDKDLIKQYNVLIEEMLQILIYVVGERYVPGISNVTKEDVIMREIIHLLCIEPMA
HSAITKSLPENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNMFFYHYTKTQ
HSKAEHTQKKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRTLLQRAVELE
THLWTEAMIQMVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSALNAVNVLMLL
EKLKRVPQLEAQKDTVNWILQMFDMVKRLREKSSLATVGVTSGSEAAKGDETQSTQDKEK
AERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKDDAIMEEESTSSAVD
YSRIALGPKRGPSVTEKEVLTCILCQEEQEVKLESAAMVLSACVQKSTALTQNRSRILEL
SGDALDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIFDLENGEY
LCPLCKSLCNTVIPIVPLQAQRINSEDAEAVAQILSLARWLEIVTVRISGYSVKNTKGEK
QSLPPFTNKGMGNSNLEFHSILSFGVQSSAKYSSSIREMLILFATTIYRVGLKVAPNEAD
SRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRSTSPQLLI
QKHLIRLLGVLLPNFKGEDTPSLLEVDMFHILVGAVLSFPSLYWEDAVDLQPSSVSSAYN
HLYLFHLTTLAHIMQIIISSATESPTAHSSDNSEEAQSAQSFCREVCQYTSGCFSQDIPG
WLVWDCVKKGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLPTNLFLLF
HEYRDTVNPLLQRWCADPVVLSCLKGKSIAIRYPRKRNHLIELPEDYSCLLNQASHFRCP
RSSDDEQKHPVLCLFCGAMLCSQNTCCQEMVNGEELGACTSHALQCGAGVCMFLKIRECK
VVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCQERYRKLHLLWQQHCIVEEIARS
QETNQIFFGFNWQLL
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagccgacagaggtcccgcggcgggcggccgggccgccgcgcaggccccg
gagcgagctatgtggtgtgatgaaagattcgacttccaagctgcatttttacagtgcttg
gcaaaacatgtgccaaatatttactcagctgaaatggaccccttggtggagaaacaagaa
gaaatggtccaggcagcaatattataccccctagaatgttatttgtttggggaggaccca
gatatattcctggagaaactacagcagagtggaacctcccagctgtgtggaaaggtgttc
aaaggaggggagacaacatactcttgcagagactgtgcagttgatccaacttgtgtgctc
tgtatcgactgcttccagaatagcattcataagaaccaccgatacaagatgcatagctcc
actggaggtggattttgtgactgtggggatacagaggcatggaaggctggaccactgtgt
acgaaacatgagcctggagcatcaacttctccaaaagaaaattctgaatgtcagttgaat
gaagaaattatggagcattctaggagagtgtttccctctgtgataaaatatattgtagat
atgcttatctgggaggaagagaaggaactgcctgtggagctcaccattagcagagagaag
gtagacagctactactgtgtccttttcaatgatgagcaccactcttacgatcatgtcatc
tacagcctgcaaagggcactgggctgtgaacttggtgaagcccagttgcatacaactgcc
atagataaagagggtcgtagagctgttaaggcaggacattatgcctcttgtcaggaagca
aaagaagaaattaagaggcattctgaaaatgtttctcaacgacctcttcacgtggaggtt
ctgcatgctgatgtcatggcacaccagaagtttgccttacgccttggttcttggctgaac
aaactcatgagctattcaagtgacttccgccagatcttttgccaaatatgtctcaaggaa
gaagctggatctgaaaagccctgctttataagcaagttgatgctatgggatgcaaggctt
cataaaggggcaaggaaggttcttcatgaacttatcttcagtagttttttcatggaaatg
gaatacaaaaaactttttgctgttgaatttgtgaagtattacaaggcattgcaaaaggaa
tacatcagtgatgatcatgacagagttctctctgtgacagcactctctgttcagatgttc
actgtacctaccctggcccgacttcttattgaagagcaaaatgtaatcaccaccattaca
gagacactcctagaagtgcttccagagtacctagacaaaaatgacaagttcaacttccaa
ggctacagccaggacaaactgaaccgggtgtattcagtaatatatgacctcaggtatatc
ttagtcagcaaacctacagtatggacagaccgtctgagggagcgttttttagaaggattt
gtttctttcctgaggattctaacttgcatgcagggaatggaggagataaaaaggcagatt
ggtcagcacattgaggtggaccctgactgggaagcagctattgccattcagatgcagctc
aagaacattcttttgatgttccaggagtggtgtgcctgtgatgaagagctgctgctcagg
tcttacagagaatgtcataaagctgtgatgaggtgcagcacaaacggccgctctcgggag
aagacagtatttcacttatgtggccataccctggagagtagaccttacagagtgtctgca
gatcctgtcagcatacatttgccactgtctaggactcttgctggtcttcatgtacgatta
agcaagactggagctatctcaagattgcacgagtttgtttctcctgaagaatttcaagtg
gagctgctagtagaatatcctttgcgatgtcttgtcctggttgcacaggttgctgcagag
atgtggagaaggaatgggctctccctgataagccaggtattctattatcaagatgttaaa
tgtagagaagagatgtatgataaagacatcatcatgctccagataggtgcatctcttatg
gatccaaaccagtttctcctgctgatactgcagagatatgagcttgttgatgctttcaaa
aagatgaaacccaccaaagataaggatttgattaagcaatataatgttttaatagaagag
atgctacagattctcatctatgttgtgggggaaagatatgtgcctggaatcagtaatgtg
acaaaagaagatgtaataatgagagaaatcatccatcttttatgtattgaaccaatggct
cacagtgcaattaccaagtccttgcctgaaaacgagaacaatgaaactggcttggagaat
gtaattgataaagtggctacattcaagaaaccgggtgtctctggtcatggagtttatgaa
ctgaaagatgaatgtttgaaggaattcaatatgttcttttatcactacactaagacccag
cacagcaaggctgaacatacacaaaagaaaagaagaaaacaagaaaacagggatgaagca
ttgccaccacctcctcctccagacttcagtcctgcattcagcaacgtggtgaggattctg
aactgtgatgttatgatgcacattctgcgcacccttctgcagagggcagtggaactggaa
acccacttgtggactgaggcaatgatccaaatggtgcttcatctcctttctttagggtta
ctagaagagaagcagcagttacagaagtctcctgaagaagaagtaacctttgatttttat
cacaaagcaacacgaatgggaagctcagccttgaatgctgtgaatgtgttaatgcttctg
gagaaattgaagagagttccccagttagaggcacagaaggacacagtcaattggatactg
cagatgtttgacatggtgaagcgattgagagaaaagtctagtttggcaacagtaggagtt
acatcaggctcagaagctgcaaaaggtgatgagacacagagcactcaggataaagagaaa
gctgagcggaagagaaaggcggaagcagcgaggttgcaccgtcagaagataatggcccag
atgtctgccttgcagaggaatttcattgaaacccacaagctcctgtatgaaaacacactg
gaggcccaggggaaagatgatgctattatggaagaagaaagcacctcttcagcagttgat
tactccagaattgctttgggtcccaaacgaggtccatctgtcactgagaaggaagttctg
acctgtattctttgtcaggaggagcaagaagtaaagttagaaagtgctgcaatggtatta
tctgcctgtgtgcagaagtcaactgccttaactcagaataggagcagaattcttgaactc
tcaggagatgcactagaccctctcttcatgcaccctgacttaccctgtgggacccacaca
gggagctgtggtcacgtaatgcatgcagcctgctggcagaagtactttgaagcaatgcag
ctgaacttccgacaacgtctgcatgttgaacagatatttgacttggagaatggagaatat
ctttgtcccctttgtaaatctctgtgcaatactgtgattcctatagttccattgcaggct
caaagaataaacagtgaggatgcagaggcagtagctcaaatcctatctctagctaggtgg
ctggagattgtcacagtcaggatatcaggctacagcgtgaaaaatactaaaggagagaaa
caaagtcttccacctttcaccaataagggaatggggaactcaaatttggaattccattcc
atccttagttttggagttcagtcctcagccaagtactcaagcagtatcagggagatgctt
attctctttgccaccaccatttacagagttgggctcaaagttgctccaaatgaagctgat
tcccggattcctatgatgacctggagcacatgtgcttttaccatccagtgtatagaaaac
ctcttggaaacagagggcaagcctttgtttggatccctacaaaatagacagcacagtggc
cttaaagcattagtgcagtttgcagctgctcagagatcaacatccccacagctcctgatt
cagaaacacctgattcgtcttctaggagttctcctaccaaactttaaaggagaggacact
ccatcactcttagaagtagatatgttccacattttggtgggagctgtcttatcctttcca
tctttgtactgggaagatgctgtagacttgcaaccttcatcagttagttcagcctataac
cacctctacctcttccatctgacaacactggcacacataatgcaaatcatcatctcttca
gcaacagaatcccccactgctcactcatctgacaatagtgaggaggcacaatctgcacag
tctttctgtagagaggtttgccagtacactagtggttgctttagtcaggatattccaggc
tggcttgtttgggattgtgttaaaaaaggcatcatgccttaccttcgttgtgctgcttta
ttttttcattatttgctgggagtttctccacctgaggagctactacaagtttctgaagaa
gggcaattcaaggcactttgtagttacctctccctacctacaaatctgttcctgctcttc
catgaataccgggacacagtaaatccactgcttcaaaggtggtgtgctgatccagtggtg
ttaagttgtttgaaagggaaaagcattgcaataaggtatcctaggaaaagaaatcattta
atagagcttcctgaagactacagttgccttctgaatcaagcctctcattttagatgccca
cggtcttctgacgatgaacaaaaacacccagtattgtgtttattctgtggggcaatgttg
tgttcccagaatacttgctgtcaggagatggtgaatggggaagagctgggagcttgtact
tctcatgctcttcagtgtggagctggagtctgcatgtttctcaaaatcagggaatgcaaa
gttgtcctcattgaaggtaaaaccaggggttgcctgtatcctgcaccctacttggatgaa
tatggagaaacagatccaggtctaaaaagaggcaatcccctgcacttatgtcaggagcgt
taccggaagctgcatctgctgtggcagcagcactgcattgtagaggagattgccaggagc
caagaaacaaatcagatcttctttggattcaactggcaactgctctga
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integrated database retrieval system
