KEGG   Taeniopygia guttata (zebra finch): 100224406
Entry
100224406         CDS       T01082                                 
Symbol
TOB2
Name
(RefSeq) protein Tob2
  KO
K14443  protein Tob/BTG
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100224406 (TOB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100224406 (TOB2)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100224406 (TOB2)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100224406 (TOB2)
SSDB
Motif
Pfam: BTG PAM2
Other DBs
NCBI-GeneID: 100224406
NCBI-ProteinID: XP_030118772
Ensembl: ENSTGUG00000009941
LinkDB
Position
1A:47443919..47452692
AA seq 340 aa
MHLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGYRCVHI
GETVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGSVKVLYLDDSEGC
SATELDKEIKSSFNPDAQVFVPIGSQDNSLSNSPSPSFGQSPSPTFIPRSAQPITFTTAT
FAATKFGSTKMKKGGGAGGGGGGAGAVQQPRMVRSPTTNLLKHKGLSLSMHSLNFVGSTG
SQAPQSQLSPNAKEFVYSGASPGASSLFFDGVASESQASSIPPASQFNASTGGTFDMAQV
FGGSTNSLFLEKSPFVEGLSYNLNAMQYPSQSFQPVVLAN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcatctggagatcaaagttgctcttaacttcatcatctcatacctgtacaacaagctt
cctcggaggcgggcagacctgtttggtgaggagctagagcgcctgctgaagaagaagtat
gagggtcactggtaccccgagaaacctctgaagggatctggctatcgctgtgttcatata
ggagagacagtggatccggtggtggagctggcagccaagaggagcgggctggctgtggag
gatgtgcgtgccaatgtgccagaagagctgagtgtctggattgatccttttgaggtttcc
taccagatcggtgagaagggctctgttaaggttctctacctagatgacagtgagggctgc
agtgccacagagctggacaaagaaatcaagagcagcttcaaccccgacgcccaggtattt
gtccctattggcagccaggacaactcgctgtccaactctccatccccctcctttggccag
tcacccagccccaccttcatccctcgctctgctcaacccatcacgttcaccactgccacc
tttgctgccaccaagttcggctcgaccaagatgaagaagggtggaggagctggaggaggg
ggcggtggagcaggggctgtgcagcagccaagaatggtcaggtctcccaccaccaacctg
ctgaagcacaagggcctctccctgtctatgcactctctgaacttcgtcgggagcactggg
agccaagccccacagtcacagctctcccccaatgccaaggagttcgtttacagtggcgcc
tcgccaggagccagcagtctcttcttcgatggtgttgccagtgagagccaggccagcagc
atcccaccagcatcgcagttcaacgccagcacaggtggtacctttgatatggctcaggtc
ttcggtggcagcaccaatagcctctttttggagaaatctccttttgtggaaggactcagc
tacaacctgaatgccatgcagtatcctagccagtcgttccagcctgtcgtcctggccaac
tga

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