Taeniopygia guttata (zebra finch): 100225252
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Entry
100225252 CDS
T01082
Symbol
COL26A1
Name
(RefSeq) collagen alpha-1(XXVI) chain isoform X1
KO
K24358
collagen type XXVI alpha (EMI domain-containing protein 2)
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
100225252 (COL26A1)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
100225252 (COL26A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
EMI
Motif
Other DBs
NCBI-GeneID:
100225252
NCBI-ProteinID:
XP_030143800
Ensembl:
ENSTGUG00000004358
LinkDB
All DBs
Position
19:complement(6566407..6732998)
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AA seq
505 aa
AA seq
DB search
MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTR
TVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFT
GSNCEEGSSGRQHGSFPSQDQCMNCTRLADMTERLNTLEAKILLLEAAERSPALENNLPI
TGTTATWYEELLPDAFPLLNPGTVLRKTVGSAEPKGHRGAEEQLIPQGVPGQVGPPGPVG
PTGLPGPPGPKGEKGQPGERGPAGPPGMLGPQGPRGLPGETGIPGPPGPPGPPATPSLPL
TFQQGVLYSLQPTAEKENGEAQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPP
GPIGAPGSQGLPGSPGQPGPKGSKGDRGERGQAGLPGERGIKGLPGEPGKKGEEGDKGAD
GEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVIPGSPLRSSIKIKRGGPR
QPQAHQILSSLLDDGEARRRSHRMK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgctcttttcttgtcctggtgctgctgcctgcatggatgcgcgctgggcacc
ggcttcctctatcaattcccagcatcaaccctgcagcacaactacccagagcagagctcc
ggctcgccgggcagcggcttcgccagtcgccggcactggtgtcactacacagtcacaagg
acagtctcctgccaggtgcagaacgggtcagaaacggtgatccagagagtttatcagagc
tgccgctggccaggaccttgtgccaacttagtgagttacaggactctcatcaggcccacg
tacaaaatgtcctacagaactgtgaccacgctggagtggaggtgctgtcctggcttcaca
gggagcaactgtgaggagggttcctctggccgccagcacggctcctttcccagccaggac
caatgcatgaactgcaccaggctcgctgacatgaccgagaggctgaacacgctggaggcc
aagatcctgctgctggaggctgcagagaggagcccagccctggagaacaacctgcccatc
acgggcaccacggccacgtggtacgaggagctgctgcccgacgccttccccctgctgaac
cccggcactgtcctcaggaaaaccgtgggatctgctgagcctaaaggacacagaggtgca
gaggagcagctgataccacagggggttccaggacaggtcggtccccccggcccagttgga
cccaccgggctgccaggaccaccagggcccaaaggagagaagggacagcccggggagagg
ggcccagcagggccaccagggatgttgggacctcaaggaccaagaggacttccaggagaa
accgggatcccaggtcccccaggtcctccagggccaccagccaccccaagcctccctctc
accttccagcaaggggttctctactcactccagcccacagctgaaaaagaaaatggagaa
gcccagctggcctccaccgtcatcgacaccatcatggcaggactgcccggcccgcgggga
gccccggggcccgtggggccaccagggccaccaggtgcttcaggacctaaagggccccca
ggacccattggagcccctggatcacaaggcttgccaggatctccaggacagcctggacca
aaaggatccaaaggagaccgaggagagagagggcaagcaggtctgcctggagagaggggc
attaagggacttcctggtgaaccaggcaagaagggtgaggaaggtgacaaaggtgctgat
ggggaaggtgtccaacagcttcgagaggctctgaagattttagctgagagagtattaatc
cttgagcacatgataggaattcatgactctttgtcttccattgagccaggctctggacag
gatgtgatcccgggctcccccctgagaagcagcatcaagatcaagcgaggaggaccccgg
cagccccaggcccaccagatcctctcttccctgctggatgatggtgaagccagaaggaga
agccaccggatgaagtag
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