Taeniopygia guttata (zebra finch): 100226403
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Entry
100226403 CDS
T01082
Symbol
HBP1
Name
(RefSeq) HMG box-containing protein 1 isoform X1
KO
K21644
HMG box transcription factor 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100226403 (HBP1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100226403 (HBP1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AXH
HMG_box
HMG_box_2
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
100226403
NCBI-ProteinID:
XP_032599652
Ensembl:
ENSTGUG00000003100
LinkDB
All DBs
Position
1A:13720204..13737673
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AA seq
530 aa
AA seq
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MATGSSDALEHPNMVWEVKTNQMPNAVQKLLLVVDKRTSGMNESLELLKCNENLPSSPGY
ASCDEHMELDDLPELQAVQTDSTPPALFQLGADVSHQECSRPSWSQHTSNSNSENAYSCE
NGVNWLTELANIATSPQSPLMQCAFYNRSSPVRIIATSKSLHSYARPPPGSSNNDPNFSK
NDVDETAVRHERANSESESGIFCMSSLSDDDDLGWCHSWPSTVWHCFLKGSRLCFHKGRN
KEWQDVEEFARSESCGKEENLPASPYKDYGSNGLKLISHEESISCGESVLKLTFDPGTVE
DGLLTVECRLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEMHLGDLCLPPGHPDAINFDDS
GVFDTFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGANNQDAERSECSTKNCASAASSH
LSSNPLYSKAGKSHSSGTASTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAI
SVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTNSGSQQH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggttcgtcagatgctttggagcatcctaacatggtgtgggaagtgaagaca
aatcaaatgcctaatgcagttcagaaactccttctggtagtggacaagagaacttcaggg
atgaacgagtcactggagttgctgaagtgtaatgaaaacctgccctcttctcctggatat
gcatcctgtgatgagcacatggaacttgatgatcttcctgaactacaggctgtgcagaca
gattctaccccacctgcacttttccagcttggtgctgatgtttcacatcaggaatgttca
aggccttcctggagccaacatacctcaaacagcaattcagaaaatgcttattcttgtgag
aatggggtgaactggttgacagaattagcaaatatagcaacaagtcctcagagtcctttg
atgcaatgcgctttttataacagatcatctcctgttcgcataatagcaacaagcaaaagt
ttacattcctatgcacgtcctccaccaggatcttcaaacaacgatcctaacttctccaag
aatgatgtggatgaaacagcagtcagacatgaaagggcgaatagtgaatcagaatctggc
attttctgcatgtcatcactttcagatgatgatgatttaggatggtgccattcctggccc
tcaactgtctggcattgttttctaaaaggctctcgtttgtgctttcataaaggacgcaat
aaagaatggcaggatgttgaagagtttgcaagatctgaaagctgtggaaaagaggaaaat
ctaccagccagtccttacaaggactatggttccaatggtttgaagttgatttctcatgaa
gaaagcatttcctgtggtgagtcagtgctgaagctgacttttgatcctggcacagtggag
gatggcttgcttactgtagaatgcagactcgatcatccattttatgttaaaaataaaggt
tggtcatctttttatccaagcttgactgtggtacagcatggcattccatgctgtgaaatg
catcttggagatctgtgtctacctcctggacaccctgatgccattaactttgatgattca
ggtgtttttgatacatttaaaagttacgattttaccccgatggactcctctgcagtgtat
gtgctcagcagcatggctcgccagcgtcgcgcttcgctgtcctgtgggggagcaaacaat
caggatgctgagagatcagaatgcagtactaaaaactgtgcctccgctgcatcgtcacat
ctttcctccaatcctttgtacagcaaagctggcaaaagccacagctcagggactgcaagt
actgtgagtgccacttctccaaacaagtgcaaaagaccaatgaatgccttcatgcttttt
gccaaaaaatacagagttgaatacactcagatgtatccagggaaagacaacagagccata
agtgtgatacttggtgacaggtggaagaaaatgaaaaatgaggaaagaaggatgtacaca
ctagaagccaaggccttggcagaggagcagaagcgtttaaatcctgactgttggaaaaga
aaacgaacgaattctggctcacaacagcattaa
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