Taeniopygia guttata (zebra finch): 100232716
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Entry
100232716 CDS
T01082
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100232716 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100232716 (NUP210)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100232716 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_2
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
100232716
NCBI-ProteinID:
XP_032606527
Ensembl:
ENSTGUG00000003823
LinkDB
All DBs
Position
12:complement(19174316..19244622)
Genome browser
AA seq
1888 aa
AA seq
DB search
MAPPAPGALPLLLLLLLHLTASSKLNTPKVLLPFTRGSRVNFTLEASEGCYRWSSTRPEV
ASIEPLGPAGCLCSQRALVQARSSQPTRLTTIISAEDTLTGEVLRCDAIVDLINGIQVVS
TTRELYLEDSPLELKIHALDSEGNTFSTLAGLVFDWTVVKDPEADGFSDSHNTLRILKFL
ESTYIPPSYILEMEKVDKQGDTILVSGIKTGSSKLKARLQESIYKNVQPAEVRLLILENI
FLNPTRDIYLLVGTSIQYRVEKLSQGKITEIAMPSEQYELQLQNNILHPKGDPSLPVAKL
DQATSTVTALQQGQTNLILVHKSICTQGVSWLPSSTVCVVAPAYLGFTVHPGDRWVLETG
RLYEITVDVYDKSSNKVYLSDNIRITTELSGEHFEVLQSSLNGSYHYVMAVKAGQTTIDA
ALTSVVDQDGGVHTLPVPVRNQQDVEIYVPILLVPSILMFPWQPKAGAYQYTIQAQGGSG
SFSWSCSNQAVATVTVKGVLSTGSDAGVSIIQAFDVRNPLLYGEMKVYVSEPSTMEFTSC
QVEAHVGQVLELPLRISGRTSVDRGELVPLSDCSQLELGVELENPGVFSPLEGRLKPTAD
FCSGVRLKAEFQGYTRLVVVYTHGHVRLSASIAIAAYLPLRAIDPPSVALVTLGSSKDML
FEGGPRPWVQEPSKFFRNVAAEDAESIASSLLELPTPGNSNQHWVRVLCRSLGEQVITLT
VGNSPTVTNPFPVVEAAAVKLICALPSRLALIPVYGSPQLALSCPLLQQSKQLVPVSNYH
NPVLDLAAYDQQGRKFDNFSSLSIVWESTNKAIARIETELPMELTLKEEGNGQKKMQGLQ
TVVVDREFGTAAISATATGFQQPHLKAARAQIPHEAVLPGPATVELMLVEDVKVSPTGLS
IYNHPDIQAELLIQQGSGYFFINTSVPNIVRVTHEETRGIALVQPLLPGSVTVMIHDLCL
AFPAPAEAEIHVSDIQELYVRVVGKVEIGKTVKAYVRVLDDSKKPFLAKYFPVMDLSLKA
ASQLVSLVPLREAPDEHTAAFLVRGMSIGQTSLMATVADRRGQRLNSAPQQIEVFPPFRL
LPRKVTLIIGAMIQIRAEGGPQLLSNIIFSIDNEHIAAVNSSGLVRGVAIGSGVVTGLLQ
AVDAETEKLVAVSQDKVEVEVVQLTAVRIRAPITRMKAGTQMPVYVMGITSTQTPFSFGS
AVPGLTFHWSVSRRDTLDVRTRHSEAAFQLPANYNFAVDVYGRVKGRTGLKVVVKVLDAA
ANQFYNMARELSDEIQIQVFEKLHLVTPEAEAEQILMSPNSFLELQTNRDRVASLSYRVL
DGPDKVPVVKVDERGFLVSGSVVGSSTIEVISQELFGINQTIIAAVKVCPISYLRISMRP
VLLTQSKEALQALPLGVTLTFTVHFHDNSGDTFHSHNAVLNFATNRDDFVQIAKGAANNT
FVIRTVDVGLTLLRVWDAEHRGTADYIPLPVQHAIFPELPDVVVGDVLCLRTLLTAQEGL
PGMWSSSSSALLLVDSKTGVALARDSGVVTVYYEIPGLLNTYREILINVPQRTTAMHVSG
VQASLQGVAASKVIVSIGETNKNLKGECSPAQIEAIAELQPQSIISCHLDFNSDAFDFPA
QEIFVAEPGFDAVSGHYRCSIRMHSLSEKQLKQLKQLSRSRAALWVTAAVRGSAGAGQQQ
QGTEVPLSSWFYADQAEMLLSNQDSSSVLKIFAAREILDSLEVKCESPAVKVLEKEKSYG
LPSYVVYTVSLADPRVPSQGSLSSSVTVSSPMTDQSITIPVTVIYLTDRTTAPVRYEASL
FQQFVQSYQVMIFTLFALIAGTAIMIIAYHAFFSPNEQYNQPVFHPRTSLQHTPNSSIGS
PAHSFSSQASSRQSSPSARLWSTGYASQ
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccgcgcccggggcgctgcctctcctcctcctcctcctcctgcacctcacc
gcctcctccaagctcaacacccccaaggtgctgctccctttcacccgcggcagccgcgtc
aacttcacgctagaggccagcgagggttgctaccgttggtcgtccacgcggccggaggtg
gcgagcatcgaaccgctggggccggccggctgcctctgctcgcagagagcgctggtccag
gcgcgctcctcgcagcccacgcgcctcaccaccatcatctccgccgaggacacgctgact
ggagaagtgcttcgctgtgatgccatcgttgatttaattaatggcattcaagttgtgtcc
acaacaagagagctctaccttgaggattcaccactggagctcaaaattcatgctttggat
tcagaaggaaacactttcagcactttggcagggttggtgtttgattggacagtggtgaag
gacccagaggctgatggcttctcagattcccacaacactctacgtattctcaagttctta
gaatccacttacatcccaccttcctatatattggaaatggaaaaagttgataagcaagga
gataccattctggtgtctggaataaaaacagggagttctaaattaaaggcaagacttcag
gaaagcatctataagaatgtacagcctgcagaagtcagattgcttattttggaaaacata
tttttaaatccaacacgtgacatttatcttctggtgggaacatcaattcagtacagagtt
gagaaactgagtcaagggaagatcacagaaatagcaatgccatcagagcagtacgagctg
cagctccagaacaacatcctccatcccaagggagatccctccctgccagttgccaagctg
gaccaggcaacatccactgtgactgcgttgcagcagggccaaaccaacctcatcctggtg
cacaagagtatctgcacgcagggtgtgtcctggctgcccagcagcactgtctgtgtggta
gctcctgcatatttgggatttacagttcatccaggtgacagatgggtcctggaaacgggc
agactttatgaaattacagttgacgtgtatgataaatcaagcaataaggtgtatttatct
gataatatccgaattactacagagctgtccggagaacactttgaggtgctgcagtcctct
ctgaatgggtcctatcattatgtgatggctgtaaaggcaggtcagaccacaattgatgct
gcactgacatcagtagttgaccaggatggaggtgttcataccttaccagttccagtgaga
aaccagcaggatgtggagatctatgttccaatattgcttgtacccagcattctgatgttt
ccttggcagccaaaagcaggagcctaccagtacaccatccaggctcagggtggaagtggc
agcttcagctggtcctgttctaaccaggcagtagccacagtgacagtcaaaggagtgctg
agcacggggagcgatgctggggtcagcattattcaggcgttcgacgtgcggaatccgctg
ctgtatggcgaaatgaaggtgtacgtgagcgagcccagcaccatggagttcacttcctgc
caggtggaggcacacgtggggcaggtgctggagctgcccctgaggatcagtggccggacc
agcgtggacaggggcgagctggtccccctgagcgactgctcacagctggagctgggggtg
gagctggagaaccctggcgtgttcagcccacttgaaggaagacttaagccaactgctgat
ttttgcagtggagtgagactgaaggctgaatttcaggggtacaccaggctggtggttgtg
tacacccacgggcacgtgcgcctcagtgccagcatcgccattgctgcttatctcccgctg
agagctatcgatccaccatcagtcgctttagtgactttgggttcctctaaggatatgttg
tttgaaggaggaccgaggccatgggtccaagaaccttccaagttcttcaggaacgttgct
gctgaggatgcagaaagcattgcctcctctttacttgaacttcccacacctggaaacagc
aaccagcactgggttagggtgctgtgcaggagcctgggagagcaggttattaccttaaca
gttgggaacagccccacagtcaccaaccctttcccagtggttgaggccgctgccgtgaag
ctcatctgtgctctcccttcccggctggctttgattcctgtttatggcagccctcagctt
gctctctcctgccctttgctccagcagagcaagcaactggttcctgtttccaattaccac
aatccagtgctggatttggctgcctatgaccagcaaggcaggaaatttgataacttcagc
tcccttagtattgtgtgggaatccacaaataaggccattgctcgtattgagacggagctg
ccaatggagctgactctgaaggaggagggcaatggtcagaagaaaatgcagggcttacaa
actgtggtagttgaccgtgagtttggaactgctgccatctctgccactgccactggattc
cagcagccccacctgaaggcagccagagcccaaataccgcacgaggctgtgctcccaggg
cctgccaccgttgaactgatgcttgtggaagatgtgaaagtgagccccactgggctctcc
atctacaaccaccctgacatccaggcagaacttctcatccaacaaggttctggatatttt
ttcattaataccagtgtgccaaatattgtaagagtgacacatgaagagactcgaggcatt
gctttggtgcagcctctgctcccaggatcagtgactgtaatgattcatgacctgtgtctg
gctttccctgccccagctgaagctgaaattcatgtgtctgatatccaggaattgtacgtg
cgagttgttggcaaggtggagattggaaaaacagttaaagcttatgtcagagttctggat
gactcaaagaaaccttttctggcaaaatacttccctgtcatggatctcagtctcaaagca
gcatctcagcttgtctcacttgtccccctgagggaggctccggatgagcacactgctgct
ttcctggtgcgtgggatgagcattgggcagacgagtctgatggcaactgtggctgacaga
agaggacagagactcaactctgctccacagcagattgaagtctttcccccatttagacta
ttgccaaggaaagtgaccctaattattggggccatgattcagatcagggctgaaggaggc
ccccagcttctctccaacatcattttctccattgacaacgagcacattgcagcagtgaac
agctctgggctggtcagaggagtggccattggcagcggggtggtgacaggattgctgcag
gctgttgatgcagagacagagaagcttgtggcagtgtcccaggacaaggtggaagttgag
gtggtacagctgacagctgtgagaattcgggcacccatcacacgaatgaaggctggtact
cagatgccagtttatgtcatgggcatcaccagcactcagactcctttctccttcggcagt
gctgtgccggggttaacgttccactggtctgtcagcaggagggacaccctggatgtcagg
acaaggcacagtgaggctgcttttcagcttcctgcaaactacaactttgcagtggatgtt
tatggcagagtaaagggaagaacaggcctcaaagttgtcgtgaaggtccttgatgctgca
gccaaccagttctacaacatggcaagggaactgtctgacgaaatccagattcaggtgttt
gaaaaacttcatctagtcactccagaggcagaagcagagcagatcctcatgtcaccaaat
tcctttcttgaacttcagaccaacagggaccgagttgcctccctaagttaccgtgtcctg
gatgggccagacaaagtccctgtagtgaaagttgatgagagaggattcctcgtctctggg
tctgtggtcggatcctcaaccattgaagtgatttcacaggagttgtttggcatcaaccag
accatcatagctgctgttaaggtctgccccatctcctacctcaggatctccatgaggcca
gttctgctgacccagagcaaagaggcactgcaggccctgcccctgggtgtgacactgacg
tttacagtccatttccacgacaactctggagatactttccattcacacaatgctgtgctc
aactttgccaccaacagggatgacttcgtgcagatcgccaagggagctgccaacaacacc
tttgtgatcaggactgtcgacgtggggctgaccctgctcagggtgtgggatgcagagcac
aggggcactgcagactacatcccactgcctgtgcaacatgccatcttcccagagctccca
gacgtggtggtgggggatgtcctgtgcctgaggaccttgctgacagcccaggaaggcctg
ccaggcatgtggagctcctcctcaagtgctcttcttctcgtggattccaagactggcgtg
gccctggcaagggactctggggtggtcactgtctactatgagatccctgggttactgaac
acctacagagagatcttgattaatgtgcctcagaggaccacagcaatgcatgtcagtggt
gtgcaggcaagcttgcagggagtggcagcttcaaaagtcatagtttcaattggggaaaca
aacaaaaatttgaaaggggagtgttcacctgctcagattgaagccattgctgagttgcag
ccccagtccattatcagttgccatctcgatttcaacagtgatgcctttgacttcccagca
caggagatttttgtggcagaacctggatttgatgcagtttcaggacactacaggtgctcc
atcaggatgcacagcctcagtgagaagcagctgaagcagctgaagcagctgagcaggagc
cgggcggcgctgtgggtgacggcggcggtgcggggcagcgccggggccgggcagcagcag
cagggcaccgaggtgcccctcagcagctggttctacgctgaccaggccgagatgctgctc
agcaaccaggacagcagctccgtgctgaaaatctttgctgccagggaaatcctggatagc
ctggaggtgaaatgcgagtccccagcagtgaaggtgctggagaaggagaagtcctatggg
ctgcccagttatgtggtgtacactgtgagtctggctgatcccagagttcccagccagggc
tccctgtccagcagtgtgactgtctccagtcccatgacagaccagtccatcaccatccca
gtgacagtgatctacctgactgacagaaccactgcacctgtgagatatgaagccagtctc
ttccagcagtttgttcagtcttaccaagtgatgatcttcacgctttttgcactcatagca
gggacagctattatgatcatagcctaccatgcatttttctcaccgaatgaacagtacaat
cagccagtattccacccaagaacaagtcttcagcacacgcctaacagttccatcgggtca
cctgcacattccttcagctcccaggcctccagcaggcagagcagcccttcggccaggctc
tggagcacgggttacgcctctcagtag
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