Thalassospira marina: CSC3H3_06610
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Entry
CSC3H3_06610 CDS
T05224
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thac
Thalassospira marina
Pathway
thac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSC3H3_06610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_06610
Transporters [BR:
thac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CSC3H3_06610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUG52421
LinkDB
All DBs
Position
complement(1465529..1467196)
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AA seq
555 aa
AA seq
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MRKFFGIMLLVGAMLASSTGITRAAETFKIGISGYPETLHPAFSSSAVQSYILGFVRRPI
MVYNHDWKVACLMCETVPSFENGLAKRVPLKDGKEGVQLSLSIPADAKWGDGTALTTKDV
AFSIEVGQNENVAVANKEVFNRIVDFNIVDDQHFTVTLDRIDYTYNAFMGVEILPSHLEK
AIYDEDPATYQKRSLYVTAPDTPGLWFGPYLVKKVITASAVMLEANPYWWGKKPQIQSIQ
LRNFENTAALEASLRAGEIDYTPGEIGLSLDKVITFEKRFGDKYDFLYKKGLSFYHLDVN
SAFAPLGDKRVRQALLYAIDRDEISQKLFDGKNAPTLDFIHPDDPVFTDDVPHYQFDPQK
ADALLNEAGWTRTGNAMRKNAQGETLHFTLYGATESSTGQLIQQVLQNRWKQAGIDVDIL
NQPARVLFGETLPQRKFDGLAMFGWISAPEHLPLTILKSDQIPTAENHFEGQNYTGYNNP
KVDALIDQIELELDFDKRVPLWHELQKIYATDLPALPLYHGENGFIFPKWLKGIRPTGHM
YPSSLWAEEWYRTDQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtttttcgggataatgctgctggtaggggcgatgctggcatcatcaaccggc
atcaccagggctgctgaaacctttaaaatcggtataagcggctatcccgaaacgttacat
cccgccttttcgtcctcggctgtgcaatcctatatcctgggcttcgtgcgccggccgatc
atggtttataaccatgactggaaagtcgcctgcctgatgtgcgaaaccgtgccatccttt
gaaaacgggctggcaaaacgggtgccgttaaaggacggcaaagaaggcgtgcagcttagc
ctgagcatccctgccgatgccaaatggggcgatggcactgccctgacgaccaaagacgtc
gcctttagcatcgaagttggccagaacgaaaatgttgccgtcgccaacaaggaagttttc
aaccgcattgttgatttcaacattgtcgatgatcagcatttcaccgttacgctggatcgc
atcgattacacctataatgcctttatgggtgttgaaatcctgccttcccatcttgaaaaa
gcgatctatgacgaagacccggcgacctaccagaaacgcagcctttatgtcacggcaccc
gatacaccgggcctgtggtttggcccctatctggtcaaaaaggtgatcacggccagtgcc
gtcatgctggaagccaacccgtactggtggggcaaaaagccgcaaatccagtccatccag
ttgcgcaattttgaaaataccgccgcccttgaagcatcgcttcgcgcaggcgagattgat
tatacccccggcgaaatcggcctgtcactggacaaggttattacctttgaaaagcgtttc
ggcgacaaatacgacttcctttataaaaagggcctgtccttttatcatctggatgtgaac
agcgcctttgccccgctgggcgacaaacgtgtgcgccaggccctactttatgccattgac
cgcgatgaaatcagccagaaactgtttgatggcaaaaacgccccgacactggatttcatc
catccagacgacccggtttttaccgatgatgtcccgcattaccagtttgacccgcaaaag
gccgatgccctgttaaatgaggcgggctggacgcgcaccggcaatgccatgcgcaaaaac
gcccagggtgaaaccctgcatttcaccctttatggtgcgactgaaagcagcaccggccaa
ttgatccagcaggtgttgcaaaaccgctggaaacaggcaggcattgatgtggatatttta
aaccagcctgcacgcgtgctgtttggcgaaaccctgccccagcgcaaatttgacggactg
gcaatgtttggctggatatcggccccggaacatttgccgctgaccattttgaaatccgac
cagatcccgaccgccgaaaaccattttgaaggccagaattataccggctacaacaacccg
aaggttgacgccctgatcgaccagatcgagctggagcttgatttcgacaagcgtgtgccg
ctgtggcatgaattgcagaaaatctatgcgaccgaccttcccgccctgccgctgtatcat
ggtgaaaacggtttcattttccccaaatggctgaagggtattcgccccacggggcatatg
tatccaagctcgctttgggcggaagaatggtatcggacggatcaataa
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