Thermus sp. CCB_US3_UF1: TCCBUS3UF1_16400
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Entry
TCCBUS3UF1_16400 CDS
T01866
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
thc
Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thc03016
]
TCCBUS3UF1_16400
Enzymes [BR:
thc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TCCBUS3UF1_16400
Transfer RNA biogenesis [BR:
thc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TCCBUS3UF1_16400
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEV16681
UniProt:
G8N9A5
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Position
complement(1638990..1640777)
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AA seq
595 aa
AA seq
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MAALVVYKGKPALAEERGEKLELTLPEGAKLRVRPKDVFFLHPGPARLDLKVPEGEAEAA
WELLQGQTVSLRELAELVYGAYTPETAYGAYLLAQEGERFVLEGEGVRARTPEELRALQE
AKRQKEARERAFQEGIARIREGKPREEDRPLLLEVEALALGERRESRVLKALGGPETPEA
AHALLLRLGVWRRENPHPRRLGLPLAPPDLPLPPLPEEAREDLTHLPAFAIDDEGSQDPD
DAVYAERVEEGFRLLVHVADVAAMVAPGSPLDQEAMRRGANLYLPEGTVPMLPPGATEAL
GLGLREVSPALTFELWISLEGEVLEERVYPSWVRVERLTYGEALGVSALKPLKELAQAFL
RKRLAQGGLDIALPEVKVRLEGEAIRITPLPPYESRLWVREAMLLAGYAAAHLALREGLP
FPFATQEAPSRRMEGEGLAAMWEQRKALKRAQLKAVPAPHRGLGLPLYAQVTSPLRRYLD
LVAHQQLRAWLRGEKPLSQGALLERVGAAEAVADLVREAERKSKLHWTLLYLLEGGYEGP
GVLVERRGGQGVFLLTELGLTAQVALSQPLPLNAEARLRFLEADLANLEVRFALV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgctcgtcgtctacaaagggaagcccgccctggccgaggaacggggagagaag
ctggagttgacccttcccgagggggcaaagctaagggtccgtcccaaggacgtcttcttc
ctccacccgggccctgcccgcctggaccttaaggtgcccgaaggggaggccgaagccgcc
tgggagctccttcagggccagaccgtgagccttagggagctggccgagctggtctacgga
gcctacacccccgagaccgcctacggggcctacctcctggcccaggagggggagcgcttc
gtgctggagggggagggggtgcgggcccgcacccccgaggagctaagggccctccaagag
gccaagcggcagaaggaagcccgggagcgcgccttccaggaggggatagcccggatccgg
gaagggaagcccagggaggaagaccgccccctcctcctcgaggtggaggccctggcccta
ggggagcggcgggaaagccgggtcctaaaggccctgggcgggccggaaacccctgaggcc
gcccacgccctcctcctccgccttggggtgtggcggcgggaaaacccccaccccaggcgg
cttggccttcccctggcccctccggacctgccccttcccccccttcccgaggaggcgcgg
gaggacctcacccacctcccggccttcgccattgacgacgaggggagccaggacccggac
gatgccgtctatgccgagcgggtcgaagaagggttccgcctcctggtgcatgtggccgac
gtggccgccatggtggccccgggaagccccttggaccaggaggccatgcgccgtggggcc
aacctttaccttcccgagggcacggtgcccatgctgccccctggggccacggaggccctg
ggcctgggcctgagggaggtttccccggccctcacctttgagctttggatttccctggaa
ggggaagtcctggaggagcgggtgtaccccagctgggtgagggtggagcggctcacctat
ggggaggccttgggggtttccgcccttaagcccctcaaggagctggcccaggccttcctg
aggaagcgcctggcccaggggggcctggacatcgccctgccggaggtgaaggtccgcctc
gagggggaggccatccgcatcacccccttgcccccttacgagagccgcctctgggtgcgg
gaggccatgctccttgccggctacgccgccgcccacctggccctgagggaaggcctgccc
ttcccctttgccacccaggaagcccccagccggaggatggagggggagggcttagcggcc
atgtgggagcagcgcaaggccctaaagcgggcccagctcaaggccgtacccgccccccat
aggggcctgggcctgcccctctacgcccaggtgacaagccccctaaggcgctacctggac
ctggtggcccaccagcagctccgggcctggctcaggggggaaaagcccctctcccagggg
gcgcttttggagcgggtgggggcggcggaggcggtggccgacctggtgcgggaagcggag
cgcaagagcaagctccactggaccctcctttacctcctggaagggggctacgagggccct
ggggtcctggtggaacggcggggggggcagggggtcttcctcctgacggaactgggcctc
accgcccaggtggccctttcccagcccctccccctgaacgccgaggcccgcctccgcttc
ctggaggcggacctggccaacctggaggtccgtttcgccctggtctag
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