Thiomonas arsenitoxydans: THI_1572
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Entry
THI_1572 CDS
T02347
Symbol
polA
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03030
DNA replication
thi03410
Base excision repair
thi03420
Nucleotide excision repair
thi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THI_1572 (polA)
03410 Base excision repair
THI_1572 (polA)
03420 Nucleotide excision repair
THI_1572 (polA)
03440 Homologous recombination
THI_1572 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thi03032
]
THI_1572 (polA)
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_1572 (polA)
Enzymes [BR:
thi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THI_1572 (polA)
DNA replication proteins [BR:
thi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THI_1572 (polA)
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THI_1572 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THI_1572 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAZ88251
UniProt:
D6CQH1
LinkDB
All DBs
Position
1550417..1553185
Genome browser
AA seq
922 aa
AA seq
DB search
MNSDVHSDSAPTLLLVDGSSYLYRAFHAMPDLRGPEGQPTGALYGMVAMLRRLREQYPVA
KGYRYAACVFDAKGPTFRNAMYDQYKAQRPPMPPDLVAQIEPIHQAVRLMGWPLLEVPGV
EADDVIGTLAVRAHAQGIRTLVSTGDKDMAQLVNDHITLVNTMSNEVLDPAGVQQKFGVP
PDRIVDYLTLVGDAVDNVPGVDKVGPKTAVKWLTEYGSLDALIEQAETVSGAAGKNLRAA
LDWLPTARKLVTIHTDCDLDGYAQAFDPDLRPAPEDAQALLPFFTRNGMRRFSAEMKAQT
VSEQAARQVSLLDGAPAAEKSAPGTYDTVLDWDRFDAWLTRIDAAELTAIDTETDSLDPM
RARLIGISLSVTPGEAAYLPLAHAYPGAPEQLPMAEVLERLRPWLENADKPKLGQNAKYD
RHVFANAGVTIRGYAHDTLLESYVIEAHKPHSLDSLVSRHLGRDDTLSYEQVCGKGAKAI
TFDQVALDVATRYSGEDADLTLQVHQRLWPQIQADAGLTRIYALEMQVSEVLQRIERTGV
LVDGDLLRAQSGELGAKMQTLEAQAFELAGGAFNLGSPKQIGEILFDRLQLPVQKKTASG
APSTDEEVLEKLAEDYPLPRVILDHRSLSKLKSTYTEKLPQMINPDTGRVHTNYAQAVAV
TGRLASNDPNLQNIPVRTAEGRRIREAFVAPKGWLIASSDYSQIELRIMAHLSQDAGLLA
AFAAGEDIHRATAAEIFGVTSLEVSSDQRRMAKVINFGLIYGMSAFGLARNLGLERSAAQ
LYIDRYFARYPGVAAYMERTRKLAAEQGYVETVFGRRLWLPDIHASGPRRAAAERAAINA
PMQGTAADLIKMAMIAVDAALVREKLRSRVVMQVHDELVLEVPEEETHWVREHIPRLMAG
VAQLDVPLLAEMGLGANWELAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgacgtgcattccgactccgcccccaccctgctgctggtggatggttccagc
tatctctaccgcgccttccacgccatgcccgatctgcgcgggcccgaaggccagcccacc
ggggcgctctacggcatggtggccatgctgcggcgcctgcgcgagcaatatccggtggcc
aagggctatcgctacgcggcctgcgtgttcgacgccaaggggccgacattccgcaacgcc
atgtacgaccaatacaaggcgcagcgtccgccgatgccgcccgacttggtggcgcagatc
gagccgattcaccaagctgtgcggctgatgggctggccgctgctggaggtgccgggagtg
gaggccgacgacgtgatcggtaccctggccgtgcgggcgcacgcacagggcatacgcacc
ctggtttccacgggcgacaaggacatggcccagctcgtcaacgaccacatcactctggtc
aacaccatgagcaacgaggtgctcgaccccgccggggtgcagcaaaagttcggcgttccc
ccagatcgtatcgtcgattacctcaccctggtaggcgacgcggtggacaacgtgcccggc
gtggacaaggtcggccccaagacggcggtcaagtggctgacggagtacggctcgctcgat
gcactgatcgagcaggccgaaaccgtgagcggcgctgcgggtaaaaacctgcgtgccgcg
ctcgactggctgcccacggcgcgcaagctggtgaccatccacaccgactgcgatctggac
ggctacgcccaagccttcgaccccgatctgcgcccggcgccggaagatgcgcaagcgctg
ctgcccttcttcacccgcaacggcatgcgccgcttcagcgccgagatgaaggcgcagacg
gtgagcgagcaggccgcccgccaggtgtcgctgctggacggcgcgccggccgccgaaaag
agcgcgccaggcacctacgataccgttctcgactgggaccggttcgacgcctggctgacc
cgcatcgacgcggccgagctcaccgccatcgacaccgaaaccgactcgctcgacccgatg
cgcgcacggctgatcggcatttcgctcagcgtcacgcccggcgaggccgcctatctgccg
ctggcccacgcttaccccggcgcgcccgagcagttgcccatggccgaggtgctcgaacgc
ctgcggccctggctggaaaacgccgacaaacccaagctcgggcagaacgccaagtacgac
cgccatgtgttcgccaacgcgggcgtgacgattcgcggctatgcgcacgacaccttgctt
gagagctatgtgatcgaggcgcacaagccgcacagcctcgacagtctggtgagccgccac
ctcggccgggacgacaccctgagctacgaacaggtctgcggcaagggtgccaaggccatc
accttcgatcaggtggcgctcgatgtggcgacgcgctattccggcgaagatgccgatctc
accctgcaggtgcaccagcggctttggccgcaaatccaggctgatgctgggctgacgcgc
atttacgcgctggaaatgcaggtcagcgaagtgctgcagcgcatcgagcgtaccggcgtg
ctggtagacggcgatctgctgcgggcgcaaagcggcgagctgggcgccaagatgcaaacc
ctggaagcgcaggcattcgagctggccggcggcgctttcaatctgggcagccccaagcag
atcggcgaaatcctgttcgaccgcctgcaactgccggtgcagaaaaagaccgcctccggt
gccccgtccaccgacgaggaagtgctggaaaagctggccgaagattacccgctgccgcgc
gtcattctcgaccaccgcagcctgtccaaactcaagagcacctacaccgagaagctgccg
caaatgatcaacccggacaccggccgggtgcataccaactacgcccaggccgtggccgtg
accgggcggctggcctccaacgatcccaatctgcagaacattccagtacgcacggccgag
gggcggcgcattcgcgaggcgtttgtcgcgcccaagggctggctgatcgcgtcgagcgac
tactcgcagatcgagctgcgcatcatggcgcacctctcgcaagacgcgggtctgctcgct
gcgttcgccgccggggaagacattcaccgcgcgaccgcggctgagattttcggcgtcact
tcgctggaagtcagcagcgatcagcgccgcatggccaaggtcatcaacttcgggctgatc
tacggcatgagcgccttcggcctggcacgcaacctcggcctggagcgcagcgcggcgcag
ctctacatcgaccgctacttcgcccgctatccgggtgtcgcggcgtatatggagcgcacc
cgcaagctggcggcggagcagggctatgtcgaaaccgtgttcgggcgacgactgtggctg
cccgacatccacgccagcgggccgcgccgggcggcggccgagcgcgccgccatcaatgcg
ccgatgcaaggcaccgcggccgacctcatcaagatggcgatgatcgccgtcgatgccgca
ctcgtgcgcgaaaaactgcgcagccgggtggtgatgcaggtgcacgacgagctggtgctc
gaagtgcccgaggaagaaacgcactgggtgcgcgaacacattccccgcctgatggcgggc
gttgcccagctcgacgtcccgctgctggccgaaatgggcctgggcgccaactgggagctg
gcgcactga
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