Tetragenococcus halophilus NBRC 12172: TEH_15050
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Entry
TEH_15050 CDS
T01640
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03030
DNA replication
thl03410
Base excision repair
thl03420
Nucleotide excision repair
thl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEH_15050 (polA)
03410 Base excision repair
TEH_15050 (polA)
03420 Nucleotide excision repair
TEH_15050 (polA)
03440 Homologous recombination
TEH_15050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thl03032
]
TEH_15050 (polA)
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_15050 (polA)
Enzymes [BR:
thl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEH_15050 (polA)
DNA replication proteins [BR:
thl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TEH_15050 (polA)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TEH_15050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TEH_15050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
11261203
NCBI-ProteinID:
BAK94832
LinkDB
All DBs
Position
complement(1518970..1521615)
Genome browser
AA seq
881 aa
AA seq
DB search
MAKNKLLLVDGNSVAFRAFYALHSSLERFKNPSGLHTNAIYAFNLMFENVMEKEKPSHVL
VAFDAGKTTFRNEMYEDYKGGRAKTPGELNEQLPYIRELINGLGISYYELKNYEADDIIG
TLAEQVDKDKFDVTILTGDRDLTQLATDDVKVAITKKGVSDTEDYTPEHIAEKYDGLKPK
QIIDMKGLAGDSSDNIPGVTKIGDKTAIKLLNQYDSVEGVYEHIDEMKQSKMKENLINDK
ETALLSKKLATINISAPIDVSIDSLKYEGSDLDKLVPFYKEMNFRTFLDNLDVGEEENKM
EDILFEVVDEPTEEMFTDEMALYVEMLGENYHVEDIVGVVWGNDKKIYVTKSDKIFENKA
FKNWLTDKSRGKRVYNAKSTQVALNRYIALPEGFSFDVLVAAYLLDNTDNTDDIAGICAH
YDYQDIQSDVAVYGKGAKKGLPEDDETFFAHLARKIKAIQWLTPKLEGELKDKNQLDLYK
NLEAPISSILAEMEITGITVDAQRLNQMKDEFAQSLQKIEEKIFEQAGEKFNINSPKQLG
HILFEKMNLPVIKKTKTGYSTAVDVLEQLKDKSPIVENILKYRQIAKIQSTYVEGLLKVI
LQDGKVHTRYLQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQAFVPQKHDWVIYSSDYSQ
IELRVLAHVSKDEHLQEAFNENQDIHASTAMRVFDIEKPEDVTANIRRQAKAVNFGIVYG
ISDYGLSQNLGISRKEAKNYIDTYFERYPGVKKYMNDSVEQAKEKGFAETLYHRRRYLED
INSRNFNLRSFAERTAINSPIQGSAADILKIAMIELDKQLKEKQLETNMLLQVHDELVFE
VPESELKTLDQLVKEVMENAVHLDVPLITESSWGKTWYDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaataaattactactggtagatggtaatagtgttgcatttcgcgcattctat
gccttacacagttcattagaacgctttaaaaatccaagcggtcttcacaccaatgcaatt
tatgcttttaatttaatgtttgaaaatgtaatggaaaaagaaaagcctagtcatgtacta
gtagcttttgatgcaggcaaaactacttttcgtaatgaaatgtatgaagattataaaggt
ggacgggctaaaacaccgggagaattaaatgaacagcttccttatataagagagttgatt
aatggccttggaatctcttattatgagttaaaaaactatgaagcagacgatattatcggt
actttagccgagcaagtagataaagataaatttgatgttactattctcacaggagatcgg
gatttaacccagttagcaactgatgatgtaaaagtcgctattaccaaaaaaggtgtcagt
gatacagaagattatacgccagagcatattgctgaaaaatatgatggtttaaaacctaaa
caaattatcgatatgaaaggactagcgggagattcgtctgataatattccaggcgtaaca
aaaattggggataaaactgcaatcaaattattaaatcaatatgattctgttgaaggtgtt
tacgaacatattgatgagatgaaacaaagcaagatgaaagaaaacctaattaatgataaa
gaaactgccttactttcgaaaaaattagccacaataaatatatctgctcctattgatgtt
tctattgattctttaaaatatgaaggtagcgatttggataaacttgttcctttttataaa
gaaatgaatttccgaacatttttggataatttggatgtcggagaagaagaaaataagatg
gaggacattttatttgaagtggttgatgaaccgacagaagaaatgtttaccgatgaaatg
gctttatatgtcgaaatgttgggtgaaaattatcatgtagaagatattgtaggcgttgta
tggggtaacgataagaaaatttatgtcacaaaaagcgataagatttttgaaaataaggct
tttaaaaactggttaaccgataaaagtagaggaaaaagagtctataacgcaaaaagcacc
caagtagcgttgaatcgttacattgctttgcctgaaggtttttcttttgatgttttggtt
gctgcttatttattggacaatacagataatacggatgatattgcagggatttgtgcacat
tatgattatcaagatatccaatcagatgtggctgtttatggtaagggtgcaaaaaaaggt
ctacccgaagatgatgagacgttttttgcccatttagcaagaaaaatcaaggctattcaa
tggcttacgcctaaattagaaggtgagcttaaagataaaaatcaactcgatctatataaa
aatttggaagctcctatttcttccattttagctgaaatggaaataacaggtattacagta
gatgcccaacgattgaatcaaatgaaggatgaatttgctcaaagcttacaaaaaattgag
gaaaaaatctttgagcaagctggagaaaaattcaatatcaattcgcctaaacaactaggg
catattttgtttgaaaagatgaacttgcctgtcattaaaaagaccaaaacaggttactcg
acggctgttgacgttttagagcagttaaaagataaatcaccgattgttgaaaatatctta
aaataccggcagattgctaagatccagtcaacttatgttgaaggacttttaaaagtcatt
ttacaagatggtaaagttcacacgcgttatctgcaaactttaacgcaaacagggcgtcta
agttcggtcgatccaaacttacaaaatatacctattcgtctagaagaaggacgaaaaatt
cgacaagcttttgttccgcaaaagcacgactgggtcatttattcttctgactattcacaa
attgaattgcgcgtgcttgctcatgtttcaaaagatgagcatttacaagaggcatttaat
gaaaaccaagatatccacgccagtactgctatgcgtgtgtttgatattgaaaaacctgaa
gatgtaacagctaatatcagacgtcaagccaaagcagtaaactttgggattgtttatggt
atatcagattatggtttatcacaaaacctaggtatttctcgtaaagaagccaaaaattat
attgatacttattttgaacgctaccctggcgtgaaaaaatatatgaacgattctgtagaa
caagcaaaggaaaaaggtttcgctgagacgctttatcatcgtcgtcgttatcttgaggat
attaattctagaaactttaacttaagatcttttgccgaaagaacagcgattaattcaccg
attcaaggtagcgctgctgatatcttaaaaattgctatgatcgaattagataaacaatta
aaagaaaaacaactagaaacgaacatgcttttacaagtacatgatgagttagtttttgaa
gttccagaaagtgaacttaaaacactagatcaattggtaaaagaagttatggaaaatgct
gttcatttagatgttccgttgattaccgaaagtagttgggggaaaacttggtatgatgca
aaataa
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