KEGG   Thermococcus cleftensis: CL1_0441
Entry
CL1_0441          CDS       T02169                                 
Name
(GenBank) DNA-directed RNA polymerase subunit A'
  KO
K03041  DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
Organism
thm  Thermococcus cleftensis
Pathway
thm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:thm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CL1_0441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thm03021]
    CL1_0441
Enzymes [BR:thm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CL1_0441
Transcription machinery [BR:thm03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     CL1_0441
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5 TraB_PrgY_gumN
Other DBs
NCBI-ProteinID: AFL94650
UniProt: I3ZSG6
LinkDB
Position
409765..412482
AA seq 905 aa
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVVDPGLRC
ETCGARAGECPGHFGHVELARPIIHVGFAKTIHRVLESTCRECGRIKLTDEEIEEYMHKF
EVMGDRKKAKDRLIKEIHKKAKERMVCPHCGAPQFPIKFERPTIYWELRKDEEGNEYRHR
MMPSEVRDRLEKIPDKDLPLLGLHPEKARPEWMVLTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRP
LKTLSQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPIAVAMELTVPEKVT
EFNFEKLKKMVLNGPEKYPGANYVIDPEGRRIRLMENNLEIIAERLDLGWTVERHLLDGD
IVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLSVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLMFAGINVDKL
PEPDKVENGVELWSGKTIFSLLLPDDLTIWYRNKLCDEPERCEALEKLIEEKLVPDPEEV
RKLAYDGFTYIQNGKLLSGAIDKKAYGREDGKLLDIIVREYGVERARQFLDQVTKLAIWV
ITHKGFTTAIDDEDLPREALDRIHEIIREAEERVERLIEAYKNGELEPLPGKTLEETLES
NIMAVLAEARDNAGKVAEKYLGMGNHAVIMAKTGARGKMLNITQMAAMLGQQSIRGKRLY
RGYRGRVLTHFKPGDLGARARGFVTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFKYGEDGIDPMKSWQGKTVDVDRVIVRTLIK
MRGGE
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcagtcgatgaagaaggtcatcgggagtatcgagttcggaatcctctcacctcaggaa
atcagaaagatgagcgcggccgagatcaccgtccccgacacctacgacgacgacggctac
ccgatagaaggtggcctgatggacaagaggctcggcgtggtggacccgggtctcaggtgt
gagacctgcggtgccagggctggagagtgcccgggccacttcggccacgtcgagctcgcc
agaccgataatccacgttggcttcgccaagaccattcaccgcgttctggagagcacatgc
agggagtgcggaaggataaagctcaccgacgaggagatagaagagtacatgcacaagttc
gaggtcatgggcgacaggaagaaggccaaggacaggctcatcaaggagatacacaagaag
gccaaggagagaatggtctgcccgcactgtggagcgccacagttcccgatcaagttcgag
aggcccaccatctactgggagctcaggaaggacgaagaaggtaacgagtacaggcacaga
atgatgccgagcgaggttcgtgacaggcttgagaagatacccgacaaggacctgccactc
ctcggactccaccccgagaaggccaggccggagtggatggttctcaccgtcctgccggtt
ccgcccgttaccatgaggccatcaatcaccctcgagagcggtatccgcgccgaggacgac
ctcacccacaagctggtcgatattatccgtatcaacaaccgcctcaagtccaacatcgag
gccggtgcgccccagctcatcatcgaggacctctgggacctcctacagtaccacgttacc
acctacatcaacaacgagacctcaggcattccgccggccaagcacaagagcgggaggccc
ctcaagaccctctcccagcgtttgaagggcaaggaaggccgcttccgtggaaacctcagc
ggtaagcgcgtgaacttctcagcccgtacggtcatcagtccggatccgatgataagcatc
aacgaggtcggcgttcccatagcggtcgcaatggagctgaccgttcctgagaaagtgacc
gagttcaacttcgagaagctcaagaagatggtcctcaacgggcccgagaagtaccccggc
gccaactacgtcatagacccggagggaagaaggatacgcctcatggagaacaacctcgag
ataatagccgagaggctcgacctcggctggacggtcgagaggcatctcctcgacggcgac
atagtgctgttcaacaggcagccctcgctccacagaatgagcataatggcccaccgcgtc
cgcgttatgccctacagaaccttccgcctcaacctctccgtctgcccgccctacaacgcc
gacttcgacggtgacgagatgaacctccacgttccgcagacggaggaggctcaggcagag
gcgaagatactcatggaagtccagaaccacatcatctcgcctcgctacggcggcccgctc
atagctggaatccaggaccacatctccggtggctacctgctcacccgcgagggagcatac
ttcacccgctcagaggtcgagcagatgctcatgttcgcgggaattaacgtggacaagctt
ccagagccggacaaggttgagaacggcgttgaactgtggagcggaaagacgatattctcg
ctcctcctgccggacgacctcacgatctggtaccgcaacaagctctgcgacgagccggag
cgctgtgaggcccttgagaagctcatcgaggagaagctcgttcctgacccagaggaggtc
aggaagctcgcctacgacggcttcacctacattcagaacggaaagctcctcagcggtgcc
atagacaagaaggcctacggcagggaggacggaaagctgctcgacatcatcgtgagggag
tacggcgtcgagagggccaggcagttcctcgaccaggtgaccaagctggccatatgggtc
ataacccacaagggcttcacgaccgcgatagacgacgaggacctgccgagggaggccctt
gacagaatacacgagataatccgcgaggccgaggagagggtggagaggctcattgaagcc
tacaagaacggcgagcttgagcccctaccgggcaagaccctcgaggagaccctcgagagc
aacatcatggcggttttagccgaggcgcgtgacaacgccggtaaggtcgctgaaaagtac
ctcggtatgggcaaccacgcggtcatcatggccaagaccggagcgaggggtaagatgctc
aacatcacccagatggcggcgatgcttggccagcagtccattcgtggaaagcgcctctac
cgtggctaccgcggaagggttctgacacacttcaagcccggcgaccttggagccagggcc
aggggattcgtcaccaactcctacaagagcggtctaacgccccaggaatacttcttccac
gccatgggtggtagggaaggactggttgacacggccgtcaggacggcccagagcggttac
atgcagcgccgtctgataaacgcgctccaggacctcaaggtggactacgacggaaccgtc
agagacccaaccggaatcatcgttcagttcaagtacggtgaggacggaatagacccgatg
aagagctggcagggtaagacagtcgatgtggacagggtcatcgttaggaccctcatcaag
atgaggggaggtgagtga

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