KEGG   Thauera humireducens: AC731_009145Help
Entry
AC731_009145      CDS       T04211                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
thu  Thauera humireducens
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:thu00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    AC731_009145
   03410 Base excision repair
    AC731_009145
   03420 Nucleotide excision repair
    AC731_009145
   03430 Mismatch repair
    AC731_009145
Enzymes [BR:thu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AC731_009145
    6.5.1.6  DNA ligase (ATP or NAD+)
     AC731_009145
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AC731_009145
DNA replication proteins [BR:thu03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AC731_009145
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AC731_009145
DNA repair and recombination proteins [BR:thu03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AC731_009145
   NER (nucleotide excision repair)
    Other NER factors
     AC731_009145
   MMR (mismatch exicision repair)
    Other MMR factors
     AC731_009145
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1933531..1934403)
Genome map
AA seq 290 aa AA seqDB search
MKRLQRFPARRRMLRAILCAGLLSLRRGIASEDVPPAAMLAGRWREGLDPAAYWVSEKLD
GVRACWDGQRLRFRSGRPIPAPGWFIAALPDVPLDGELWLGRGRFEAVSGLVRREAVDET
GWRSVRYMVFDTPGAAGSFDERLTRLRGIVERAGLPWLQVVPQFRVVDAAALAATLDAVL
AAGGEGLMLHRADAPWENGRSEALLKLTPFLDAEARVVGHLPGRGKYAGMVGALEVETPD
GRRFRIGSGLSDADRRAPPPFGSEVTYRYRELTGGGLPRFPVFVRIRKVP
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
atgaagcgccttcaacgctttcccgcgcgtcgccgcatgttgcgcgccatcctgtgcgca
gggctcctgtccctgcgtcgcggcatcgccagcgaggatgttccgcccgctgcgatgctc
gccggtcgctggcgcgaagggctcgatccggccgcttactgggtcagtgagaagctcgac
ggcgtgcgcgcctgctgggacgggcagcgcctgcgttttcgcagcggtcggccgattccg
gcgccgggctggttcatcgcggccctgcctgacgtaccgctcgatggcgagctgtggctg
gggcgcggacgcttcgaggccgtgtcggggctcgtgcggcgcgaggcggtggacgagacg
ggctggcgttcggtgcgctacatggtgttcgataccccgggcgccgcggggagcttcgac
gaacgcctgacacgcctgcgcggcatcgtcgagcgcgccgggctgccgtggctgcaggtc
gtgccgcagttccgcgtggtcgatgccgccgcgctcgcggcaacgctcgacgcggtcctt
gcggcaggtggcgaagggctgatgctgcaccgtgccgatgcgccctgggagaacggtcgc
agcgaggccttgctcaagctgacacccttcctcgatgcagaagcccgcgtcgtcgggcat
ctgcccgggcgcggcaagtacgcaggcatggtgggcgcgctcgaggtggagacgccggac
ggccggcgctttcgtatcggctccggcctgagcgatgcggaccggcgtgctccgcccccg
ttcggcagtgaggtgacctatcgctaccgcgaactcaccggcggcggattgccacgcttt
ccggtgttcgtgcgaatccgcaaggtgccgtga

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