KEGG   Thermincola potens: TherJR_1553Help
Entry
TherJR_1553       CDS       T01226                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tjr  Thermincola potens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tjr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    TherJR_1553
Enzymes [BR:tjr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TherJR_1553
DNA repair and recombination proteins [BR:tjr03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     TherJR_1553
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(1618984..1619889)
Genome map
AA seq 301 aa AA seqDB search
MTCQIVQIEEREVRLTNLEKEMWPDGYTKADLIKYYVDMSPYILPYIKNRLFIMSRYPDG
ITGKMFYQKDAPEYTPEWVRTYPLVSERENKVVNYIVCDDLPTLVWLANQACIELHIWMA
QKERLDYPDIVVFDLDPFPPATFKDTLDVAMLVKEALDRFGLQGYPKTSGSTGLHIFLPV
RPEFTYAQVREGVRFLFEHIHAVYPEKTTLERSIDKRAGKVYLDYGQNTRGHTMTFHYSL
RPHPGAPVSTPLTWDEVRAGDIEPEDFNIKTIFPRIAKVGDLYRPLLHREQSFAGLLTLV
T
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
ttgacctgtcagatcgtacaaatagaagagagagaagtgcgcttaacaaatttggaaaag
gaaatgtggcccgatggttatacaaaagctgatttgataaagtattatgtagatatgtcc
ccttacattcttccttatatcaaaaacaggctctttattatgagccgttaccctgacgga
atcaccggaaaaatgttttaccaaaaagacgctccggaatacacgcccgaatgggtgcga
acctatccgctggtttcggaacgtgagaataaagtagtcaattacattgtttgtgatgac
ttgcctaccttagtatggcttgcgaaccaggcctgtatagaactgcatatttggatggct
cagaaggaaaggctggactacccggacattgtggtgtttgatttagatccttttcccccg
gctacttttaaggatacattggatgtggctatgttggttaaagaagccctggaccggttt
ggtctccaagggtatccgaaaacatcaggttctacgggactgcatatttttcttcctgtg
cggcctgaatttacttatgcccaggtaagagaaggggtcaggtttttatttgaacacata
catgctgtttacccggaaaaaacaacgctcgaacggtctatagacaaacgggcaggtaaa
gtatatctggattacggtcagaataccaggggccacactatgacctttcattacagcctg
cgaccgcaccccggagcgccggtttccactccgttgacgtgggatgaggtccgggccggc
gatattgaaccagaagattttaacatcaaaactatttttccacggattgcaaaagtgggt
gatttgtatcgtcctttactgcaccgggaacagtctttcgcagggcttttgacattagtc
acgtaa

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