Thermococcus kodakarensis: TK1671
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Entry
TK1671 CDS
T00226
Name
(GenBank) hypothetical protein, conserved, radical SAM superfamily
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK1671
Enzymes [BR:
tko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
TK1671
Transfer RNA biogenesis [BR:
tko03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
TK1671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Flu_PB2_1st
Fer4_12
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
BAD85860
UniProt:
Q5JIY0
LinkDB
All DBs
Position
complement(1466410..1467411)
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AA seq
333 aa
AA seq
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MAITFVSTPNMPEEIAELFKKQHYAIVGHHSGVKLCHWLKESLTKGRFCYKQKFYGIASH
RCLQMTPVLAWCTHNCIFCWRPMEGFLGTELPQPWDDPAFIVEESIKAQRKLLVGYKGNP
NVPKEKFEEAWNPKHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTLPERLEEMK
REDKLPTQLYVSLTAPDLETYNRVNVPMIPDGWERIKEFLRLMSDAQTRTVIRLTLVKGE
NMHNPEGYAKLIRLANPMFVEAKAYMFVGFSRNRLTINNMPRHEEIRAFAEELVKHLPGY
HIEDEYEPSRVVLIMRDDVDPQGRGLNGRFIKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgataactttcgtatcaacccccaacatgcccgaggagatagccgagctgttcaaa
aaacagcactacgcgatagtgggccaccacagcggcgtcaagctctgccactggctcaag
gagagccttacaaagggccgcttctgctacaagcagaagttctacggtatagcgagccac
cgctgcctccagatgacgcccgttttggcctggtgcacccacaactgcatcttttgctgg
cgcccgatggaaggcttcctgggaaccgagcttccccagccctgggatgatccggctttc
atagttgaggagagcataaaggctcagaggaagctcctcgtgggttacaagggcaaccct
aacgtcccaaaggagaagttcgaggaggcctggaatccgaagcacgcggccataagcctc
tctggcgagccgatgctttacccctatatgggtgatctcgtcgaggagttccacaagagg
ggcttcacaacattcatagtcaccaacggaaccctccccgagaggcttgaggaaatgaag
agagaagataagctcccgacccagctctacgtctcgcttaccgccccagaccttgagacc
tacaaccgcgtcaacgtccccatgatccccgacggctgggagaggataaaggagttcctc
aggcttatgagcgacgcccagacgaggactgtgataaggctgaccctcgtcaagggggag
aacatgcacaatccagaaggctacgccaagctcataaggctcgccaacccgatgttcgtc
gaggccaaggcctacatgttcgtgggcttctcaaggaacaggctcacgataaacaacatg
ccgaggcacgaggagataagggccttcgccgaggagctggtaaagcacctccctggctac
cacattgaggacgagtacgagccgagcagggtcgtcctcataatgagggacgacgttgat
ccgcagggacgaggtctgaacggaaggttcattaaagattga
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