Pseudothermotoga lettingae: Tlet_0565
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Entry
Tlet_0565 CDS
T00618
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
tle
Pseudothermotoga lettingae
Pathway
tle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tlet_0565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tle03400
]
Tlet_0565
DNA repair and recombination proteins [BR:
tle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tlet_0565
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
DUF327
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABV33131
UniProt:
A8F4P7
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Position
593797..595473
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AA seq
558 aa
AA seq
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MDLLHKAKLAPLLPGVYIFYGKNKEYIYVGKAKRLRNRLLSYFNRSNGKYSKKIQAIVNE
AEELDYIVVSNEREALLLEANLIFNHKPKYNVMLKDAEFYPYIEITKELFPAVQIVRIRS
TGGEYFGPYTDVKFVKDLIDCLQQVYQFRTCRRDMSKSTKPCMEFYMHRCAAPCTGDLEP
DSYINSSIQPLRRVLNGDISETLDLIEEKMKKHAKMMDFENAAKYRDLLVKFENVMQRQG
VVLEQWRNLDVIGRFKNSYAVLRIRGGHVVGKLSYELDSTKLEDFIFHYYMVGKNELPEA
VILERNINFDAEIYFGRPRDKLEEELLHKARENAKNQAYTSGLRKDLLNKMVKVLNLNRY
PMKIEGFDVSHLHGKLTVASVVVFFDGLPRKNEYRHYRFNSDRIDDFLTLKELVKRRYSK
HELPDMIFVDGGTGQINAVVEALMEIGKECDVVGLAKQNEIVCTRFGELILPFDSPILRT
LVRIRDEAHRFANSFHRKLRRKSALSSILDEIPGIGPKRKKKLIEAFGSVKNIRSATLQE
IAEVLGSRKLAAEILSRL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggatcttctccacaaggcgaaacttgcaccgcttttgccgggagtgtatattttttat
ggcaaaaacaaagaatatatatatgttggtaaagctaagcgactccgcaacaggctgctt
tcttattttaaccgatcgaatggaaaatacagtaaaaaaattcaggcaatcgtgaatgaa
gcagaagaactggattatatagtagtttcaaatgaaagagaggcgcttcttctggaggca
aatctcatcttcaatcataaaccgaaatacaacgtaatgctcaaggatgcggaattctat
ccttatatcgagataacgaaggagctttttccagccgttcagatagtaaggataagatct
accggcggtgaatattttggaccatacacagatgtgaaatttgttaaagatttaatagac
tgccttcaacaggtttatcagttcagaacctgtcgtagagatatgtccaaatcgacaaaa
ccatgcatggaattctatatgcatcgatgtgctgctccatgtacaggtgatttagaacca
gatagctatataaactcatctatacaaccactcaggagggttctaaatggcgacatatct
gagacactggatctgatagaagaaaaaatgaaaaaacacgcgaaaatgatggatttcgaa
aatgcagcaaaatatagagatcttcttgttaagtttgaaaatgtaatgcaaagacagggt
gttgttctggagcagtggagaaatctggatgttattggaagattcaaaaatagttacgct
gttttgagaatcagaggaggccatgtcgttggaaagctttcatacgagttggactcaacg
aaattagaagattttatatttcattattatatggttggtaaaaatgagttaccagaagca
gtgattcttgaaagaaacattaattttgatgcagaaatctattttggtagaccgagagac
aaattagaagaagagttactgcataaagccagagaaaacgctaaaaatcaggcctataca
agcggtttgagaaaagatcttttgaacaagatggtaaaagttcttaatttgaacaggtat
cctatgaaaatagaaggttttgacgtgtcgcatttgcatggaaaattaacagtcgcttct
gtcgtggttttctttgatggccttccacgtaaaaatgaatataggcattacagatttaat
tctgacaggattgacgattttttgacattaaaagaacttgtcaaaagaagatattccaag
cacgaattgccagatatgatttttgtagatggtggcactggacaaattaatgccgtagta
gaggcattgatggagatcggaaaagaatgcgacgttgtgggtttagcaaagcagaatgag
attgtttgtacacgttttggtgaactgatattaccgtttgacagtcctattttaaggacg
cttgtgcgtattagagatgaggcccacagatttgcaaatagcttccatagaaaactgcga
agaaagagtgcattgagttcgattcttgatgaaattccaggtattggtccgaagagaaag
aaaaaattgatcgaagcttttggcagtgtaaaaaatatcaggtcagccactttacaagag
atcgctgaagtacttggaagtagaaaattagctgctgagatactttcgagattatga
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