Thermovirga lienii: Tlie_0623
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Entry
Tlie_0623 CDS
T01644
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tli
Thermovirga lienii
Pathway
tli00550
Peptidoglycan biosynthesis
tli01100
Metabolic pathways
tli01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Tlie_0623
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Tlie_0623
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tli01011
]
Tlie_0623
Enzymes [BR:
tli01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Tlie_0623
Peptidoglycan biosynthesis and degradation proteins [BR:
tli01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Tlie_0623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AER66358
UniProt:
G7V8R7
LinkDB
All DBs
Position
665280..667010
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AA seq
576 aa
AA seq
DB search
MPHRLDPGEKRIQALAWLVLFSVFLLVLALFRFQILQSDKYINLAAQNRLRFIRLPPSRG
DIVDANGAILATSMKVFDLIGYPQDLLKDESINILERVFLRHGIPFTKDKIKATIKKQYS
VPYNAVTVLSNLTIAQVSDLVSDPEYPEFLYPLPVMRRVYPTGNLLPHVLGYVGEITKEE
LESLGGKGYRGGDIIGKAGVELIYEDQLRGEYGEEAIEVDARGRRVRVVDRKEPVPGDRI
ALTIDLNAQSYAASLLGDRKGVVFAMDVRNGDVKVLYSYPGYDPNALAWGLSSKEWALML
KDKDKPMMNRTISGTYPPASTYKLLTAYAALAEKKITPSTTYYCPGAFKLGNRTFRCWKT
TGHGTVNLEKAIRESCDVYFYQVGLKTGIDAITFWSRKFGLGSPTGIDLPGEASGLVADP
VWKKRVFNESWYPGDTVNYSIGQGFLLTTPIQMARVFAAIANGGKLVRPRLHAGRAVEVD
DLGLSDRFLKILRNALYQVVKSGTGRLAGGYGVEVSGKTGTAQNPHGEDHAWFVGYAPSK
KPEYVAVALVEGGGHGSSAAAPIVGQVLSFLCRGPR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataggcttgaccctggtgagaaaagaatccaggcacttgcgtggttggtgctt
ttttccgtattcttgctggtcttggcgcttttcaggtttcagattcttcaatcggacaaa
tacataaacttggcagcccagaacaggttgcgattcatacgtcttcctccatcaagggga
gacattgtggatgccaacggagccattttggctaccagcatgaaagtgttcgatttgata
gggtatccgcaggacttgcttaaggacgaaagtataaacatccttgaaagagtgtttttg
aggcacggaattcctttcacgaaggacaagataaaagcgacgataaaaaagcaatacagt
gttccttacaatgctgtcactgtcctttccaacctcacgattgcgcaggtttcggacctg
gtaagcgatcccgagtatcccgagttcctctatcctttgccggtaatgagaagggtctat
cctacggggaacctgctaccccatgttttgggatacgtgggggaaattaccaaggaagag
ctcgaaagcttgggagggaaaggatatagagggggagacataataggaaaggccggagta
gaactgatttacgaggatcaacttagaggagaatacggagaagaggccatagaggtagat
gccaggggaagaagagttagggtagtggatcgaaaggagcccgtgccgggagataggata
gccttaaccatagacctcaacgcgcaaagctatgcagcttcccttctaggcgacagaaaa
ggcgtggtgtttgccatggacgtgagaaatggagatgtgaaagttttgtatagctaccct
ggatatgaccccaatgcccttgcttggggattatcaagtaaggaatgggccctaatgctt
aaggacaaggacaagcccatgatgaataggactataagtggcacatatcctccggcatct
acttacaagctgttgacggcttatgcggccttagcggagaagaagattacccctagtacg
acttactactgtccgggagccttcaagttgggcaacaggacgtttaggtgctggaaaact
accggacatgggactgtgaacctggagaaggcgatcagggagtcctgtgacgtgtatttc
tatcaagtgggccttaagacaggtatagatgcaataaccttttggagcagaaagtttgga
ttgggaagccccacaggcatagatcttcctggagaagcatcaggtcttgtggctgatcct
gtatggaaaaaacgggtatttaatgaaagttggtatccaggggacacggtaaattattct
atagggcaagggtttttgctaaccactcctatacagatggccagggtctttgctgccata
gcaaacggaggcaagttggtgaggcccaggctgcatgcagggcgcgcagttgaagtagat
gatttgggtttatctgatagatttttgaagattttaaggaatgccttatatcaagtggtc
aagtcgggaaccggtaggcttgcaggaggttatggagttgaggtttcaggtaagactgga
acggctcaaaatccccatggagaagatcacgcgtggtttgtggggtacgctccctctaag
aaacctgaatatgtggctgtggccttagttgagggtggaggtcatggaagcagcgctgcg
gctcccattgtggggcaggtactcagttttctttgtcgcggtcccagatga
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