Tuber melanosporum: GSTUM_00005886001
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Entry
GSTUM_00005886001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
tml
Tuber melanosporum
Pathway
tml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTUM_00005886001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00005886001
Spliceosome [BR:
tml03041
]
Complex A
U1 snRNP components
U1 related factors
GSTUM_00005886001
Complex B
GSTUM_00005886001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Fra10Ac1
RhoGAP-FF1
FhaA_N
Motif
Other DBs
NCBI-GeneID:
9186395
NCBI-ProteinID:
XP_002838022
INRA:
GSTUM_00005886001
UniProt:
D5GCH0
LinkDB
All DBs
AA seq
786 aa
AA seq
DB search
MSALWQEAKNPEGRVYYYNVQTKATQWTKPVELMTPAERALQDLPWKQHKTEDGRPYWYH
AETRQTTWEMPEAYKAALERSSQSQALSHTPQTFVAGGTQHFNNSYENNERQVAIQGQHG
PDSGPGGDNAAKSMALPSSLGNDKEGPQYSTHDEAEAAFVKLLRRSGVVPDWTWEQTMRS
IIKEPQYRALKDPKDRKAVFEKYIVELKQQEHEKAKDRITKLRQDFAVMLKSHPEIKYYT
RWRIARPMIEGETIFRSSSDETERRQLFDEYIVELRKAEQEREHQHRKEASEELVGLLKS
LDLEPYTRWSEAQAIIHQNVRFQSEPKFQALSKLDVLNAFENHIKVLERAFNDKRQKMKN
MKMRKERKNREAFSALLAQLRSKGEIRVGTKWKHIHPSIKDDERYLNMLGQPGSTPLDLF
WDIMEEIERELRLKRNLVMDILDEKRFEIREQTTLEEFSNLLQSDSRTSQYDRETVSALF
DRLREKIVKRLEDDRHQHERQQRRRTDALRSAIKHLEPAVEISDTWEQVRPRIQKLEEFQ
ALESEELRRTAFDKYIRRLKEKHDDREKERDRKDRDRGERVRDKDRDTRSYRGEPELRNG
HDSSRSYHKPAASSRHHHDSHPLSRSPEVDSYEAERRRAAGERERQYQHRGNTGRSNSHH
RSERGGGAESRHGRDRQESVYDRERREREEERERLYRTRGDDEYRARRRPRGLSPAEESE
DGRRDSKRSRRERSPRDRTPRERNSRDRTPSNWDARSPPRVKQLAKLVDKVQVDKDEESE
EGEIAE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccttgtggcaggaggcaaaaaatcctgagggtcgtgtctattattacaatgtt
cagacaaaagctacgcaatggacaaaacctgttgagctcatgactccagctgagagagct
ctccaggatttaccgtggaaacaacacaagactgaagatggccgaccctattggtatcac
gcagaaacgagacaaacaacttgggaaatgcccgaagcttataaagcggcacttgagaga
agctctcagtcgcaagcgctgtcgcataccccgcaaacatttgtcgctgggggtactcaa
cactttaataatagttacgaaaataatgaacgccaggttgcaatccaaggccaacatggt
ccggattcaggaccgggtggcgataatgccgccaaatccatggccctcccgtcttcgctc
ggcaatgataaagaaggccctcaatattccacccatgatgaggcggaagcagctttcgtg
aagctcttgcgtcgaagtggtgtcgtcccagattggacatgggaacagaccatgcgctcg
atcattaaggagccccaatatcgggctctaaaggacccgaaggataggaaggccgtcttt
gagaagtatatcgttgaattaaagcagcaagaacatgagaaggccaaagataggattaca
aagttgagacaggacttcgcagtaatgctcaagagccacccggagattaagtattatact
agatggaggattgcccgtcctatgattgaaggtgaaactattttccgctcctcttctgac
gagacagagcgccgtcagttgtttgacgaatatattgtcgaacttcgcaaggccgagcaa
gagcgcgaacaccagcatagaaaggaagcctcggaggagttggtcgggctgctcaaatcg
ctcgatctagagccatatacacgttggtcagaagcccaggccattatccatcagaatgtg
cgttttcagtctgaaccaaagttccaggcactgtccaagcttgacgtgttgaacgcgttt
gagaatcatataaaagtactcgagcgagccttcaatgataaaaggcaaaaaatgaagaac
atgaagatgcggaaagagagaaagaatcgggaagcattctccgcattattggctcagctt
cgatctaaaggtgaaatccgtgtgggaaccaaatggaaacatattcacccatccatcaaa
gatgatgagagataccttaacatgcttggccaaccaggatccaccccacttgatctcttt
tgggatataatggaagaaattgaacgagagctccgactgaagaggaacctggtgatggat
atattggatgaaaagcgatttgaaatcagggaacaaactactcttgaagaattttcaaat
ttgcttcagtctgactctcgtacctcacagtatgaccgtgaaacggtttcggctctgttc
gataggctccgcgagaagatcgttaaacgattggaagatgaccgccaccaacatgaacgt
cagcagcgccgccgcaccgatgcacttcgttccgcaattaaacatctcgagccggcggtc
gaaatttcggatacgtgggagcaagtacggcctcgaattcagaaattagaggaattccag
gctcttgagtcagaagagttgcgtcgtacggcatttgataagtatatccgccggctgaag
gagaaacatgatgatagagaaaaggagcgtgacagaaaagatcgggatcgtggggaaagg
gtgcgtgacaaagacagggataccaggtcttatcgcggtgaacccgaattgcgcaatggc
catgactctagcaggtcctaccataagcctgcagcatcatctcgacatcatcacgattct
catccgctaagccgctcgccagaggtagattcttatgaggctgagagaaggagggctgct
ggcgaacgggagagacagtaccaacatagaggaaacactggtaggagcaattcccatcat
cgttctgagagaggggggggagcagagagcaggcacggacgcgataggcaggagagtgtc
tatgaccgtgagcgcagagagagggaggaagagagagaaagactgtacaggaccaggggc
gatgatgagtaccgtgccaggcggaggcccagggggttaagcccggctgaagagagtgaa
gatggtaggcgcgattcgaagaggtctaggcgtgagcgtagtccacgagatagaacccca
agggaaaggaattcgagagataggactcctagtaactgggatgctcggtcacccccacgt
gttaaacaacttgccaaattagtggataaggtgcaggttgataaggatgaggagagcgaa
gaaggtgaaatcgccgagtag
DBGET
integrated database retrieval system
