Thermotoga maritima MSB8: Tmari_1770
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Entry
Tmari_1770 CDS
T02663
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tmm
Thermotoga maritima MSB8
Pathway
tmm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tmari_1770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmm03400
]
Tmari_1770
DNA repair and recombination proteins [BR:
tmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tmari_1770
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tmari_1770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
AAA_30
DUF87
Kinesin
AAA_22
AAA_25
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGL50694
LinkDB
All DBs
Position
complement(1736584..1738578)
Genome browser
AA seq
664 aa
AA seq
DB search
MFKLVSEFEPTGDQPQAIEKLVEGLNRGMRFQTLLGVTGSGKTFTMANVIARVNRPALVI
SPNKTLAAQLYQEFKTFFPENRVEFFISYYDYYQPEAYIPTKDLYIEKNADINDVIVRMR
MSTLKSVRTRRDVVVVASVSCIYATGDPNDFDRMNINLAVGDRIDVLELAERLARIGYQR
TEDVSLSGCFRLKGDTVEIYPTYQDEGIRIEFFGDEVDSITLIDRFNRTTLEHLDKIIIY
PAVEFITTEEKLKRAVESIREELNERLSELKKQGKILEYERLKQRTLNDIELLETMGYCP
GIENYSRHFDGRKPGEPPYTLLDYFDKDFIVFIDESHITVPQLRAMYNGDRSRKKNLVEY
GFRLPSAYDNRPLTFEEFLKKTGQIIFVSATPGDFELSISEQVVEQIIRPTGLVDPEVEV
RPTAGQVDDLVNEIVKVKERGERALVTVLTKKTAELLSEHLTELGIRSLYLHSELDAIER
VEVLKKLRRGDVDVVVGVNLLREGLDLPEVSLVAIMDADVEGFLRSETTLIQIIGRTARN
VNGKVIMYADRITNAMKRAIEETNRRRRIQLEYNRKHGITPRSVIKPLEIEVFEQFMVKE
EPERYGDTVKNIFEMKKTLSPEEYMAVLEEEMYRAASELRYEDAAALRDELFRIREEIKK
KKGL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagctggtgagtgaatttgagccaacgggtgaccagccacaggccatagaaaaa
cttgtagaaggtttgaacaggggaatgagatttcaaacgctcctcggtgttacggggagc
ggaaagactttcaccatggccaacgtgatagcgcgtgtgaacagacccgcccttgtgatc
tcaccgaacaagacgcttgccgcccagctttatcaggagttcaaaacgttcttcccggaa
aatcgagtggagttcttcataagttactacgattactatcaaccggaggcctatattcca
acgaaggatctttacatagagaagaacgctgacatcaacgatgtgatcgtgcgaatgaga
atgtccacgttgaaatctgtgagaactcgtcgcgatgtggtggtagttgcgagtgtttcg
tgtatttacgccacgggagacccgaacgatttcgataggatgaacataaatctcgctgtt
ggagatagaatagacgttctggaactcgcggaaagactggcaaggataggctatcagaga
acggaggatgtgtctctttctggatgtttcaggctgaagggagacacggtggagatctac
ccgacgtatcaggatgaagggatcaggatcgaattcttcggagacgaagtggactcgata
acgttgatagacagattcaatcgcaccacactggagcaccttgacaagatcatcatctat
cccgccgttgaatttatcacaacggaggagaaactcaaaagagccgtcgaatcaataagg
gaggagcttaacgaaagactctcagagctcaaaaaacagggaaagatcctcgagtacgaa
cgcttgaagcagagaactctgaacgacatagagctgctggagaccatgggatactgtcct
ggaatagagaactactccaggcacttcgatggaagaaagccgggagagcctccgtacact
cttctcgattatttcgataaagatttcatcgttttcatagacgagtcacacatcacggtt
cctcaactcagggccatgtacaacggagacagatccagaaagaaaaatctggtcgaatac
ggttttcgtctgccttccgcttacgacaacagaccgctgactttcgaagaatttttgaaa
aaaacaggccagatcatcttcgtttccgctacgccgggagacttcgaactctcgatctct
gaacaggtcgtcgagcagatcattagacccacaggactcgtggatccagaggtggaggta
cgtcccaccgcggggcaagtggatgatcttgtgaacgagatcgtgaaagtgaaagaaaga
ggggagagggccctcgttacggtgctcaccaaaaaaacggcagagcttttgagtgaacat
ctgacggaacttggaataagatcgctctatcttcactccgaactggacgccatagaaagg
gttgaggtcctgaagaaactgaggcgaggagacgtagacgtggtcgttggtgtgaacctt
ctgagggagggtctcgatcttcccgaggtgtcactggtagcgatcatggacgcggacgtg
gaaggcttcctgcgatctgaaacaacgctcatccagattatagggagaaccgcaaggaac
gtcaacgggaaggtcatcatgtacgccgacaggataacaaacgcgatgaagagagccatc
gaagaaacgaacagaagaaggagaattcagctcgagtacaatagaaaacacggtatcact
ccacgttccgtgataaagcctctggagatagaagtattcgaacagttcatggtgaaagaa
gagcctgagaggtacggagacactgtgaaaaacatctttgagatgaagaaaacgctctcc
ccagaggagtacatggccgttctcgaagaggaaatgtatcgggctgcaagtgagctcagg
tacgaagatgcagcggccttgagggatgagctgttcagaatcagggaagagataaaaaag
aaaaaggggctctga
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