Phaeoacremonium minimum: UCRPA7_7639
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Entry
UCRPA7_7639 CDS
T03102
Name
(RefSeq) putative pre-mrna-splicing factor clf1 protein
KO
K12869
crooked neck
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_7639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_7639
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_7639
Spliceosome [BR:
tmn03041
]
Complex B
Other components
Prp19-related factors
UCRPA7_7639
Complex C
UCRPA7_7639
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
UCRPA7_7639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
HAT
TPR_19
Suf
TPR_16
TPR_8
TPR_9
TPR_2
TPR_15
NRDE-2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
19328416
NCBI-ProteinID:
XP_007918357
UniProt:
R8BC25
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MESSRGPPRVKNKAAAPVQISAEQLLREAVDRQEGALQAPTQRFADLEELHEFQGRKRKE
FEDYVRRNRISLKNWLQYAGWELEQKEFARARSVYERALDVLPNNVTLWIRYIEAEIKSR
NINHARNLLDRAVTRLPRVDKLWYKYLYVEEMLGAIANTRQVFERWMQWEPDEAAWGAYI
RLEKRYGEFDRARQIFQQFVVVHPEPRNWIKWAKFEEEFGTSDLVREVFQTAIESLGDEF
VDERLFIAYARYEAKLKDYDRARAIYKFGLDNLPRSKSMLLHKEYTTFEKQFGDREGVED
VVLSKRRRHYEEQVKENPKNYDIWIDYTRLEETSGDIDRARDVYEKAVAQVPPTQEKRHW
RRYIFLWIFYALFEELQTKDVERARQIYDTCLTLVPHKKFTFAKVWLMKAQFEVRQGQLT
AARKTLGRAIGMCPKDKIFKGYIELEQKLYEFERCRTLYEKHIMYNPANCQTWIKWAELE
RGLDDLDRTRSIFELAIGQPVLDMPEVVWKAYIDFEEEEGEYEKTRDLYERLLAKADHPK
VWISYAQFEINIPEGEEEEAEDEEQPISEEAKARARKVFERAHKSMKDRELKAERVSLLK
AWLSFEQEHGSPEDIEKIQKQMPRQVKKRRKLEDDTWEEYIDYVFPADDKQTQDLSKLLA
MAQAWKQTGSNSAAGG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctcacgcggtcctccgcgggtcaaaaacaaggccgctgcacccgtgcagata
tcggcagagcagctgctacgagaagccgtcgatcgacaggagggcgcccttcaagccccg
acacagcggtttgccgacttggaagaacttcatgagttccagggacgcaagagaaaagag
ttcgaagattatgtgcgccgcaatcgaatcagtctcaagaactggctgcagtacgcaggg
tgggaactcgagcagaaagagtttgcgcgtgctcgctccgtctatgagcgagcgctcgat
gtattgcctaacaatgttacgctgtggattcgatacatcgaggctgagatcaagagccgc
aatatcaatcatgcgcgcaacctgctggaccgcgctgtcacgcgactgcccagagtcgac
aagctatggtacaagtacctttatgtcgaggagatgcttggggcgattgccaatacaaga
caagtgtttgagagatggatgcaatgggagccagatgaggcggcctggggtgcttacatc
cggctagagaagagatacggcgagttcgacagagcgaggcagatctttcagcagtttgta
gtggtacatcccgagccgcgcaactggataaaatgggcgaagtttgaggaagagttcggc
accagtgatctggttcgggaggttttccagactgcgatcgagtctcttggtgatgagttc
gtggatgaaaggcttttcattgcatatgctcgttatgaagccaaactcaaagactatgat
cgagcgcgagccatctacaagtttggcttagacaacctccccagatccaagtccatgctt
ctccacaaggaatatactacgttcgagaagcaatttggtgatagggagggtgtcgaagat
gtcgttttgtccaagagaaggcggcactacgaggagcaagtgaaggagaaccctaaaaac
tacgacatatggatcgactacaccaggctcgaggagacttctggtgacattgaccgagca
cgcgacgtctatgaaaaggctgttgctcaggtgccacccacccaggagaagcgtcattgg
aggcggtatatcttcctatggatcttttacgcgcttttcgaggagttgcaaacgaaagat
gtcgagcgagcccgccagatttatgacacatgtctcacgcttgttcctcataagaagttc
acatttgccaaagtatggcttatgaaagctcaatttgaggttcgccaaggccaactcacc
gcagcacgaaagactcttggccgagctatcggcatgtgtccgaaagacaagatcttcaag
ggctacatcgagttggagcaaaagctctatgagtttgagcgttgcaggacgctgtacgag
aagcatatcatgtacaacccagccaattgtcaaacatggatcaaatgggccgagctagag
cgtggcctggacgacctggaccgaacacgcagcatatttgagcttgctattggccagcct
gtgcttgatatgcccgaggtcgtctggaaagcctatattgacttcgaggaggaggaaggc
gagtacgagaagacgcgcgatctatatgagcggctgctggcgaaggccgatcatccaaag
gtctggattagctacgcgcagttcgagatcaatatacccgagggcgaggaagaagaggca
gaagacgaggagcagccaatcagcgaggaggcgaaggcacgtgctcgcaaagtcttcgag
cgtgcacacaagagcatgaaggatcgcgagctcaaggcagagagagtgtcgctgctcaag
gcttggctcagcttcgaacaggagcatggctcgccggaagatatcgagaagatccagaag
caaatgccacgccaagtcaagaagcggaggaagctggaggacgatacttgggaggagtac
atcgactatgtcttcccggcggacgacaagcagacgcaagacttgtcaaagttgttggcg
atggcgcaggcttggaagcagacagggtccaactcggcagcaggaggttga
DBGET
integrated database retrieval system
