Tremella mesenterica: TREMEDRAFT_35180
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Entry
TREMEDRAFT_35180 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_35180
Enzymes [BR:
tms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TREMEDRAFT_35180
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TREMEDRAFT_35180
Prokaryotic type
TREMEDRAFT_35180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
18492667
NCBI-ProteinID:
XP_007007703
JGI:
Treme1_35180
UniProt:
R7SDD8
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
KVDEDPPLDQLMRLLQHGGKEVPNGESVVYWMRMEDVRIDDNTALYKASQKAQQLHLPLV
VLNILSPGEWKIHDRSSKKIDFLLRNLRDLKPKFDALNIPLYMTSFDRRLQIPRRVITDL
MPLFKSHHLFVNLEYEVDELRRDIATVKFGQEKGVKVECFHDRLVVPPGRITSQAGKPMS
VFSPWQRQWAKLLEKEPNLLEVSPLPQGNDPSVRQGPLKDLFDATSVPEDIKDFVPEDKH
LLKECWPEGTDAARQLLDRFLHTKARKKQFQLVSPLTEGAEEDDKHSRVREYQDGRNLVD
GDNSSRLSPYLALGVISGRMVLNEAAKLGKGKRLESGRDTGVGMWVQEVSWRDFYNHVMA
RCPRVSMGRPFLEKFADVQWEINEENLQAWKDGKTGYPIVDAAMRACKARGWMENRVRMV
SACFLVKSLLLDWRLGEKYFMESFIDGDLAANNGGWQWTASTGTDPQPYFRIFNTLTQSQ
KCDPNGDYIRYWVPELKNLKGKAVHDPFHSMPRNEFNKLGYPIPIVDHKQSRERALFRYK
NVGQKEE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
aaggtagacgaggatcctccattggatcaactcatgaggctccttcagcatggtgggaaa
gaagttccaaatggcgaaagtgtggtttattggatgaggatggaagatgtgagaatcgac
gacaacaccgcattgtacaaggccagtcaaaaggctcaacaacttcaccttccactcgtc
gtcctcaacatcctctctccgggcgaatggaaaatacacgaccgcagttcgaagaaaatc
gatttccttctcagaaacctcagagatctcaagcccaaattcgatgcgctcaatatccct
ctctatatgacttcttttgatcgtcgactgcaaatacctcgtagggtgatcaccgacttg
atgccccttttcaaatcccatcatttgtttgtgaacctggaatatgaagtcgacgaactt
agacgagatatagccactgtcaagttcggtcaggagaagggcgtcaaagtggagtgtttt
catgatcggttggtggtaccgcctggtaggatcactagtcaagctggaaagcccatgtct
gtcttcagtccttggcaacgtcaatgggcaaagttgctggaaaaagaaccgaatctgtta
gaggtgtcaccccttccgcaaggaaatgacccttctgtccgtcaaggccccctcaaagat
ttgtttgacgcgacttcggttccggaggatatcaaagactttgttccggaagataagcac
cttttgaaagagtgctggcctgaaggtaccgatgcggcgagacagctcttagacaggttt
ctccacaccaaagctaggaagaagcagtttcagctagtctcaccgctcacagaaggggcg
gaggaagatgacaaacattctagggtcagggagtatcaagacggtcggaaccttgtcgac
ggggataactcgtccaggctcagtccttacctcgctttgggagtcatcagcgggagaatg
gttttgaacgaagctgcaaaattgggcaaggggaaacgattggagagtggacgggatacc
ggagttggcatgtgggttcaagaagtttcatggagagatttttacaaccatgtcatggcc
agatgcccaagagtcagtatgggacgacctttcctggaaaagtttgccgacgtacaatgg
gagatcaacgaagaaaatcttcaggcatggaaagacggcaaaactggatatccaatagtg
gacgcggcgatgagagcgtgcaaggcaagaggatggatggagaatcgtgtcagaatggtt
tctgcttgtttcttggtcaaatctttattactagattggcgattgggggagaaatacttt
atggaatcttttatcgatggtgatctcgccgctaataatggaggatggcaatggactgca
agtacaggtacggatccccaaccgtattttcgaatcttcaatactttaacccaatcacag
aaatgtgatcctaatggtgattatatccgatattgggtcccagaacttaaaaaccttaaa
ggtaaagcggttcacgatccatttcattccatgccgagaaacgaattcaacaaattggga
tatccaattccgatagtggatcataaacaaagtagagaaagggctcttttccgatacaaa
aatgttggacagaaggaagagtga
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integrated database retrieval system
