Tremella mesenterica: TREMEDRAFT_39135
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Entry
TREMEDRAFT_39135 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03251
translation initiation factor 3 subunit D
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tms03012
]
TREMEDRAFT_39135
Translation factors [BR:
tms03012
]
Eukaryotic type
Initiation factors
eIF-3
TREMEDRAFT_39135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3_zeta
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
18493020
NCBI-ProteinID:
XP_007004507
JGI:
Treme1_39135
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MVLDFVLPEVHDNEDGSWGPSTSTLPAQFKDIPYAPFSKSDRITRIADWHEPAPEGAPGR
RNYNTNTRRPGREAFGASEANAFGYIHDDDDKSFSLVDSGSRPSTRGRGMMRGGRGGRGF
TIGRGRGGRGGVYPSRGGFGGRGRGRGGYGDWNKPQRIRDSSVMIGSEWRLLEEIDFTRL
AKLNLSVDAPEDLGAHGTLMPYDKSYDRANTRNEKPLEVVDKLKYNISTSDDPIIADMSA
KKVARIFATDSILAVLMCASRSVNSWDIILDRRGDQLFFDKRPNGPFDYITVNEHALDSL
PEDDDDPSNINSPSSLSLEATYINQNFANQVIAEGKSWTPSPNPFYSPEEETEPLASCLY
RYRKFDLSVAEDEEFEVVVRTEVDAYLDKKDHLITIKALNEFDPRVSSGAKALDWRKHLD
TQRGAILATEIKNNNAKLARWSVQGILAGAEQMKMGYIARANTRDATRHVIVGVQSYKPR
DFAGQMNISLSNGWGIVRTIADLALKQPEGKYVLVKDPNNPILRLYSVPQNAFDLIEEDT
IPEEEEEEE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggtgctagattttgtgctgccagaagtacatgataacgaggatggatcatggggtccc
tcgacttctaccctcccagcacagtttaaagacatcccatacgccccattctcaaaatct
gacaggatcacccgtatcgccgactggcatgaacctgcacctgaaggtgcacccggacgt
cgcaactacaacacgaacactcgtcgtcctggtcgtgaagccttcggagcctctgaagcc
aacgcatttgggtatattcatgatgacgacgacaagtctttctccctcgttgacagcggt
agcaggccgtctacgaggggaagaggtatgatgcgtggtggtcgaggtggtcgtgggttc
acgattggaagggggagaggtggtaggggtggggtctatccatctaggggtgggtttggt
ggtcgtggtcgtggccgtggagggtatggggattggaacaagccccaacgtatcagagac
tccagtgttatgatcggaagtgaatggcggcttttggaagagattgacttcactcgatta
gcaaaactcaatctcagcgtcgatgccccggaagatcttggagcacatgggactttgatg
ccttatgataaatcttatgacagggcgaacacccgtaatgaaaaaccattggaagtagtg
gataagctcaaatacaatatctccacttcggacgatcctatcattgccgacatgtcggct
aagaaagtcgctcgaatcttcgccacagactccatcctcgcagttctcatgtgtgcgtct
cgttctgtcaactcttgggatatcatcctcgaccgtcgtggcgatcaacttttcttcgat
aaacgtcctaatggtccattcgactatataacagtaaacgaacacgctttagattctcta
cctgaagatgatgatgatccgtccaatatcaactcaccctcatctctctcgctcgaagcc
acatacatcaatcaaaacttcgctaatcaggtcatcgcagaaggcaaaagttggacaccc
tcgccaaatccgttctactctccagaggaagagacggaacctttggcgtcgtgtttgtac
agatacaggaaatttgacctgtccgttgctgaggacgaagagtttgaggtggtcgttagg
acagaggtagatgcgtatttggacaagaaagatcatttgatcactatcaaggcgttgaac
gaatttgatccgagggtcagtagcggtgctaaagcattggattggaggaaacatcttgac
acgcaaagaggagctatcttagctacggagatcaagaacaataatgccaagttggccagg
tggtcggtgcagggtatcctggcaggtgccgagcagatgaagatgggctacatcgcccgt
gccaacacccgtgatgccacgagacacgtcattgtcggtgtacaatcatacaaaccgcga
gactttgcaggacagatgaatatctctttgtctaacggatggggtatcgtacgtaccatc
gcggatctagctctgaaacagccagagggcaagtatgttttggtcaaagatcccaacaat
cccattctgcgattatattctgtgccccagaacgctttcgatctcatcgaggaggatacc
atcccggaggaagaagaggaagaagaataa
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