Tremella mesenterica: TREMEDRAFT_74703
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Entry
TREMEDRAFT_74703 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tms
Tremella mesenterica
Pathway
tms03030
DNA replication
tms03410
Base excision repair
tms03420
Nucleotide excision repair
tms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TREMEDRAFT_74703
03410 Base excision repair
TREMEDRAFT_74703
03420 Nucleotide excision repair
TREMEDRAFT_74703
03430 Mismatch repair
TREMEDRAFT_74703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_74703
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_74703
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_74703
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TREMEDRAFT_74703
DNA Replication Termination Factors
ELG1-RFC complex
TREMEDRAFT_74703
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TREMEDRAFT_74703
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TREMEDRAFT_74703
Check point factors
HRAD17(Rad24)-RFC complex
TREMEDRAFT_74703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med21
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_11
AAA_22
AAA_16
RuvB_N
AAA_30
AAA_assoc_2
AAA_19
Mg_chelatase
AAA_24
AAA_2
AAA_23
AAA_14
AAA_28
SLFN-g3_helicase
AAA_7
ResIII
DEAD
AAA_5
bpMoxR
DUF815
ArsR
AAA_18
ERM_helical
Motif
Other DBs
NCBI-GeneID:
18499257
NCBI-ProteinID:
XP_007007645
JGI:
Treme1_74703
UniProt:
R7SAX4
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MLSEEISTDMDRITQLQDAILDLLTITHTSIEYITKRTQFEQTSLSIPQTLSTPLAAPRE
EYKESIQAFVADIVRRSQDIEKLIEALPKKDDSFARAARLQQLQDEMTIANAEYMKAVKQ
AEELLAELRMATFGVRPAAPPQDPRLQPWVEKYRPKTIDDVSSQENTVAVLRKALASTNL
PHMLFYGPPGTGKTSTILALARQLFGPDLFRSRVLELNASDERGITVVREKIKTFARETP
RHVSLSSDGKTYPCPPFKLIILDEADSMTHDAQSALRRIMETYSRITRFCLVCNYVTRII
EPLASRCSKFRFKPLAQGSSQARMEMIVKAEGVDIEDGVLDRILELAGGDLRKAITFLQT
AQRLHGATSPPTPISAMSIHEISGVVPDTTIHSLLRSMGVDPFSGIDLSIRSTFDTVRTA
VKSISREGWSAGQVLEQLHDALIPIPTIPAMQKSQAALAIAECDKGLCEGGDEELQLLDC
CLRIREVMGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcgaggaaatctccactgacatggacaggatcactcagttacaagatgcaata
ttggatcttctcactatcactcacacatctatcgaatatataaccaaaagaacgcagttc
gaacagacaagtttgtccataccacaaacattatccacccctctggccgcacccagggag
gagtacaaggaatctatacaagcattcgttgcggacattgtaagacggagtcaagatata
gaaaagctcatcgaggcgttaccgaagaaagatgacagtttcgccagggctgcaagacta
caacagcttcaagacgaaatgacaatagccaacgcggaatacatgaaagctgtcaaacaa
gcggaagagctcttggcagaattacgcatggctacgttcggtgtgagacctgcagctcct
ccacaggatcctagacttcaaccttgggtagaaaagtatcgaccgaaaactatcgacgat
gtgtcatctcaagaaaataccgtcgccgttttgagaaaagcattagcatcgactaatcta
cctcacatgctcttctacggtccaccaggtacaggcaaaacatctaccattctcgctctc
gcccgtcagcttttcggaccggacctattccgatcccgtgtgttggaactgaacgctagt
gacgaacgagggatcaccgtggtgagggaaaagatcaaaacatttgcaagggagactcct
agacatgtgagcttgtcttcagatggaaagacgtatccctgtcccccgttcaaactcatc
attctcgacgaagcagattctatgacacatgatgcccaaagtgcgttgagaaggattatg
gagacttattctcggattactcgattttgcttggtgtgcaattatgtaacgagaatcata
gaaccccttgcatcccgatgttccaaattccgcttcaaacccctcgctcaaggcagctct
caagcgcgtatggagatgatcgtaaaagcggagggcgtagacatagaggatggcgtgtta
gaccgtattctcgaattggccggaggagatctgcgtaaggccattacatttttgcagact
gctcaaaggctacatggagcgacttcacctccaactcctatctcagccatgtcaattcat
gaaatatccggagttgtaccagacacaactatccattccctccttcggtccatgggcgtc
gatccattctccggtatcgacctttccattcgttccacttttgacacagtccggaccgcc
gtcaagtccatttcccgagaaggttggtccgccggtcaagtcctcgaacaattacacgac
gctttgatacccatccccaccattcccgctatgcagaaaagtcaagcggctctggctatc
gccgaatgcgacaaggggttgtgtgaagggggggatgaagaattacagttgttagattgt
tgtttgaggataagggaggtgatggggagatga
DBGET
integrated database retrieval system