KEGG   Tremella mesenterica: TREMEDRAFT_74703
Entry
TREMEDRAFT_74703  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
tms  Tremella mesenterica
Pathway
tms03030  DNA replication
tms03410  Base excision repair
tms03420  Nucleotide excision repair
tms03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TREMEDRAFT_74703
   03410 Base excision repair
    TREMEDRAFT_74703
   03420 Nucleotide excision repair
    TREMEDRAFT_74703
   03430 Mismatch repair
    TREMEDRAFT_74703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tms03032]
    TREMEDRAFT_74703
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_74703
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_74703
DNA replication proteins [BR:tms03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TREMEDRAFT_74703
  DNA Replication Termination Factors
   ELG1-RFC complex
    TREMEDRAFT_74703
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TREMEDRAFT_74703
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TREMEDRAFT_74703
  Check point factors
   HRAD17(Rad24)-RFC complex
    TREMEDRAFT_74703
SSDB
Motif
Pfam: Med21 AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_11 AAA_22 AAA_16 RuvB_N AAA_30 AAA_assoc_2 AAA_19 Mg_chelatase AAA_24 AAA_2 AAA_23 AAA_14 AAA_28 SLFN-g3_helicase AAA_7 ResIII DEAD AAA_5 bpMoxR DUF815 ArsR AAA_18 ERM_helical
Other DBs
NCBI-GeneID: 18499257
NCBI-ProteinID: XP_007007645
JGI: Treme1_74703
UniProt: R7SAX4
LinkDB
Position
Unknown
AA seq 490 aa
MLSEEISTDMDRITQLQDAILDLLTITHTSIEYITKRTQFEQTSLSIPQTLSTPLAAPRE
EYKESIQAFVADIVRRSQDIEKLIEALPKKDDSFARAARLQQLQDEMTIANAEYMKAVKQ
AEELLAELRMATFGVRPAAPPQDPRLQPWVEKYRPKTIDDVSSQENTVAVLRKALASTNL
PHMLFYGPPGTGKTSTILALARQLFGPDLFRSRVLELNASDERGITVVREKIKTFARETP
RHVSLSSDGKTYPCPPFKLIILDEADSMTHDAQSALRRIMETYSRITRFCLVCNYVTRII
EPLASRCSKFRFKPLAQGSSQARMEMIVKAEGVDIEDGVLDRILELAGGDLRKAITFLQT
AQRLHGATSPPTPISAMSIHEISGVVPDTTIHSLLRSMGVDPFSGIDLSIRSTFDTVRTA
VKSISREGWSAGQVLEQLHDALIPIPTIPAMQKSQAALAIAECDKGLCEGGDEELQLLDC
CLRIREVMGR
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgctcagcgaggaaatctccactgacatggacaggatcactcagttacaagatgcaata
ttggatcttctcactatcactcacacatctatcgaatatataaccaaaagaacgcagttc
gaacagacaagtttgtccataccacaaacattatccacccctctggccgcacccagggag
gagtacaaggaatctatacaagcattcgttgcggacattgtaagacggagtcaagatata
gaaaagctcatcgaggcgttaccgaagaaagatgacagtttcgccagggctgcaagacta
caacagcttcaagacgaaatgacaatagccaacgcggaatacatgaaagctgtcaaacaa
gcggaagagctcttggcagaattacgcatggctacgttcggtgtgagacctgcagctcct
ccacaggatcctagacttcaaccttgggtagaaaagtatcgaccgaaaactatcgacgat
gtgtcatctcaagaaaataccgtcgccgttttgagaaaagcattagcatcgactaatcta
cctcacatgctcttctacggtccaccaggtacaggcaaaacatctaccattctcgctctc
gcccgtcagcttttcggaccggacctattccgatcccgtgtgttggaactgaacgctagt
gacgaacgagggatcaccgtggtgagggaaaagatcaaaacatttgcaagggagactcct
agacatgtgagcttgtcttcagatggaaagacgtatccctgtcccccgttcaaactcatc
attctcgacgaagcagattctatgacacatgatgcccaaagtgcgttgagaaggattatg
gagacttattctcggattactcgattttgcttggtgtgcaattatgtaacgagaatcata
gaaccccttgcatcccgatgttccaaattccgcttcaaacccctcgctcaaggcagctct
caagcgcgtatggagatgatcgtaaaagcggagggcgtagacatagaggatggcgtgtta
gaccgtattctcgaattggccggaggagatctgcgtaaggccattacatttttgcagact
gctcaaaggctacatggagcgacttcacctccaactcctatctcagccatgtcaattcat
gaaatatccggagttgtaccagacacaactatccattccctccttcggtccatgggcgtc
gatccattctccggtatcgacctttccattcgttccacttttgacacagtccggaccgcc
gtcaagtccatttcccgagaaggttggtccgccggtcaagtcctcgaacaattacacgac
gctttgatacccatccccaccattcccgctatgcagaaaagtcaagcggctctggctatc
gccgaatgcgacaaggggttgtgtgaagggggggatgaagaattacagttgttagattgt
tgtttgaggataagggaggtgatggggagatga

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