Trichechus manatus latirostris (Florida manatee): 101352792
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Entry
101352792 CDS
T05135
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tmu03037
]
101352792
Cilium and associated proteins [BR:
tmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101352792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ATG16
Motif
Other DBs
NCBI-GeneID:
101352792
NCBI-ProteinID:
XP_004377334
UniProt:
A0A2Y9DMF8
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MSLGLEDSLEAQLALETVIQTLESSVLGSSQEKGLSVQGPAQDSQPTHLPARIREIVTRN
LSQPESTAPLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKFNAVSERL
EQAVQLESGELETLEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA
KILQYKKKCTELEQQLLERSTELEQQQLRDTEHSQDLESALIRLEEEQQRSASLAQVNAM
LREQLDQVDSANQALSEDIRKVTTDWTRSRQELEQREAAWRREEESFNTYFNNEHSRLLL
LWRQVVGVRRLVSEVKMATERDLLQLGGDLARTSRAVQEAGLGLSAGLRLAESQVEAALE
KQALLQSQLEEQLRDKVLREKDLAQLQVQSDLDKADLSARVTELALAVEHLQNQSLEKDQ
ANKALTEKLEVLESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDTESGVQLSGSERTAN
TSDGSLRGLSGPRTPSPPRRSSPSRGRSPRRGPSPACSDFSTLALIHSALHKRQLQIQDM
RGRYEASQDLLGTVRKQLSDSEGERRALEEQLQCLRDKADGVTQAREDAQREVQRLRSAN
NLLSREKDSLANSLQAAQQQAEELQQEREKLQAAQEELRRQRDRLEEEREDVVQDGAQAR
RELERSHRQLEQLEGRRSGLAKELVEVREALSCTALQRDMLQAEKAEVAEALTKAEAGRV
ELELSMTKLRVEGASLRDSLSKLSALNESLAQDKLGLNRLVAQLEEEKAALLGRQRLAEQ
EATLAREELERLEQLRLEQEVERQGLEGSLRVAEQAREALDHQLPTLSQERSRLQEQLAQ
LSRQLSGREQELEQAQREWQRQVEALERSAREKEVLAKERASLAVQLAAAEREGRTLSEE
TTHLRLEKEALESSLFEVQRQLAQLEARREQLEAEGQALLLAKEALTGELAGLRQQMATA
EEKVALDKELMAQKLVQAEREAQASLREQRAAHEEVLQRLQREKEEAWRELEAERAQLQS
QLQREQEELLARLESEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL
MGTRHSLATISLEMERQKRDAQSRQEQDRSTMNALTSELRDLRAQLEEAAATHAHEVKRV
QEQARDLGRQRDSCLREAEELRTQLRLLEDARDGMRRELLEAQRKVRESQEGREVQRQEV
GELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARATVG
KEAGELRAGLQEVERSRLEARRELQELRRQMKMLDSENARLGRELAELQGRLVLGERAEK
EGRREALGLRQKLLRGEASLEAVRQELQGAQRKLHDQEGEFRARERGLLGSLEEARGTEK
QQLDHARSLELKLETARAEAAELGLRLSAAEGRAQGLEAELARVEAQRRAADAQLGGLRS
ALRRGLGLGRAPSPAPRPSPDSPVRGAPTGGSGEGFSSPSSLERSPGSEPPSPGPATSPA
PPDLDPEAVRGALREFLQELRSAQRERDELRTQTRTLSRQLTEVEAERDSATSRAKQLQK
AVAESEEARRSMDGRLSGAQAKLALQEESMQRSERERRAALDQVAALERSLQATEAEHRV
SQEKMSKMKANEVKLESDKRRLKEVLDASESRTIKLELQRRSLEGELQRSRLGLSDREAQ
AQALQDRVDSLQRQVADSEVKAGTLQLTVKRLSGVLSKVEESEGALRNKVQGLTETLAQN
SASLTSTQDKNLHLQKALTACEHDRQVLQERLEAARQALSEARKQSNSLGEQVQTMRGEL
ADLELQRTEAEGQLQQLQEVLRQRQESEAVALHTVQKLQDERRLLQERLGSLQRALAQLE
AEKQEAERSALRLEKDRAALRRMLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELA
EAQRQIQQLEAQVVVMEQNHSPAQLEADEQQRLELQQEVERLRSAQVQTERTLEARERAH
RQRVRGLEEQVSTLKGQLQQEFRRSSAPFTPPSGPSGK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggggctggaggactcgctagaggcccagctggccctggagacggttatccag
acactggagagcagcgtcctggggtccagccaagagaaaggcctcagtgtgcagggcccg
gcccaggactctcagcccacccacctgcctgcccgcatccgggagattgtcacccgaaac
ctctcccagcctgagagcacagccccgctgccggccacagagatggcgtcactgctttca
ctgcaagaggagaaccagctgctgcagcaggagctgtcccgcgtggaggacctgctggcc
cagagccgtgccgagcgcgatgagcttgccatcaagttcaacgcagtcagcgagaggctg
gagcaggctgtgcagctggaatcgggggagctggagacgctggagccgagggggctggtc
cgacagagtgtggagctgcggcggcagctgcaggaggagcaggcctcctaccggcgcaag
ctgcaggcctatcaggagggtcagcagcggcaggcccaacttgtgcagcggctgcaggcc
aagatcctccagtacaagaagaagtgcacagagctggagcagcagctactggagcggtcc
accgagctggagcagcagcagctgagggacactgagcacagccaggacctggagagtgcc
ctcatcaggctggaggaggagcagcagaggagtgccagcctggcccaggtgaatgccatg
ctccgagagcaactggaccaggtggactcggccaaccaggctctgagtgaggacatacgc
aaggtgaccaccgactggacacgcagccgccaggagctggagcagcgggaggcagcgtgg
aggcgtgaggaggagtcctttaacacctacttcaacaacgagcacagccgcctgctcctc
ctctggaggcaggttgtaggggtccgacggctggtcagtgaggtgaagatggccaccgag
agggacctgctgcagctgggaggggatctggccaggacttcacgggctgtccaggaggca
ggcctgggactgagtgcaggcctgcggctggccgagagccaggttgaggcagctctggag
aagcaggccctgctgcagtcccagctggaggagcagctgcgggacaaggtgctccgtgag
aaggacctggcccagctgcaggtgcaaagtgacctggacaaggccgacctcagtgccaga
gtgacagagctggccctagcagtggagcatcttcagaaccagagtctggagaaggatcag
gccaacaaggccctcacagagaagctcgaggtcctggaatccctgcggctacaggagcag
gcagctctggagacagaggacggagaggggctgcagcagaccctgagggacctggcccag
gccgtcctctcggacacagagagcggcgttcagctaagcggctcggaacgcacggccaat
acatcggatggcagcctacggggactctcgggcccgcggaccccgtccccaccgcggcgc
tcctcgcccagccgcggtcgttccccacgccgaggcccttccccggcctgctccgacttc
tccacactcgccctgatccactcagccctgcacaagcgccagctgcagatccaggacatg
cgtgggcgctacgaggcgagccaggacctcctgggcaccgtgcggaagcagctcagcgac
agtgagggcgagcgtcgagcccttgaggaacagctgcagtgtctgcgggacaaggctgat
ggggtcacccaggcccgtgaggatgcccagcgcgaagttcagcgtctgcgaagtgccaac
aacctcctgagcagggagaaggacagcctggccaacagcctgcaggcggcccagcagcag
gctgaggagctgcagcaagagcgggagaagctgcaggcagcccaggaggagctgcggcgc
cagcgagaccggctggaggaagagcgggaggatgtggtacaggatggtgcacaggcacgc
agggagctcgagcgcagtcacagacagctggagcagctggaagggaggcgctcagggctg
gcaaaggagctggtggaggtgagggaggcactgagctgtaccgcgctgcagcgggacatg
ctgcaggccgagaaggctgaggtggccgaggcactgaccaaggctgaggctggccgtgtg
gagctcgagctctccatgaccaagctgagggtggagggggcctctctgcgggactccttg
tccaagctgagtgccctcaacgagagcctggctcaggacaagctggggctgaaccgcctt
gtcgcccagctggaggaggaaaaggcagccctgttggggcggcagcggctggctgagcag
gaggccaccttggcgcgggaggagctggagcggctggagcagctgcgtctggagcaggag
gtggagcggcagggcctagagggctccctgcgggtggcagagcaggctcgggaggccctg
gaccaccagcttcccacgctgagccaggagcgcagccggctgcaggagcagctggcccag
ctctcccggcagctgagtgggagagaacaggagctggagcaggcccagcgggagtggcag
cggcaggtggaggcgctcgagaggtcagcccgggagaaggaggtgctggccaaggagcgg
gccagcctggcggtgcagctggcggctgctgagcgcgaaggtcggaccctgtccgaggag
accacacacctacgcctggagaaagaggccctggagagcagcctgtttgaggtgcagcgg
cagcttgcccagctcgaggcccgccgggagcagctggaagcagaagggcaggccctactg
ctggccaaggaggccctgactggggaactggcaggcctgcggcagcagatggcaactgca
gaggagaaggtggcgttggacaaggagctgatggcccagaagttggtgcaggctgagcgg
gaggcccaggcctctctgcgggagcagcgggcagcccatgaggaggtcttgcagcggctc
cagcgggagaaggaggaggcgtggcgggagctggaggccgagcgggcccagctgcagagc
caactgcagcgggagcaggaggagctgctggcccggctggagtccgagaaggaggagctg
agcgaggagattgcagccctgcagcaggagcgggacgagggcctcctcctggccgagagc
gagaagcagcaggccctgtccctgaaggagtctgagaagaccgcactgtcagagaagctg
atgggtacgcgacacagcctggccaccatctccctggagatggagcggcagaagcgagat
gctcagagccggcaggagcaggaccggagcaccatgaatgccctgacgtccgagctgcgg
gacctacgggcccagcttgaggaggctgctgcgacccacgcccatgaggtgaagagggtg
caagaacaggcccgagacctgggcaggcagagggattcttgcctgcgtgaggctgaagag
cttcggacccagctgcgcctgctggaggatgcccgtgatgggatgcggcgggagctgctg
gaagcccagcgcaaggtgcgggagagccaggaaggccgagaggtccagcgccaggaggtg
ggcgaactgaggcgcagcctgagcgagggggccaaggagcgcgaggccctgcggcgctcc
aatgaggagctgcggtccgccgtgaagaaggccgaaagcgagcggatcagcctgaagctt
gccaatgaagacaaggagcagaagctggcattgctggaggaggcccgggcaaccgtgggc
aaggaggctggggagctgagggctgggctgcaggaggtggagcgctctaggctggaggct
cggagggagctgcaggagctccggaggcagatgaagatgctggacagtgagaatgccagg
ctgggtcgggagttggcagagctgcagggccgcctggtgctgggcgagcgggcagagaag
gagggccggcgggaggccctgggcctacggcagaagctgctgagaggcgaggccagcctg
gaggcagtgcggcaagagctccagggggcccagaggaagctgcatgatcaagaaggagag
ttccgggcccgcgagcgaggcctgctgggctccttggaggaggcgcgcggaactgagaag
caacagctggaccatgcccgcagcctggagctgaaactggagaccgcgcgggccgaggct
gcagagctagggctgcggctgagcgcggccgagggccgggcgcaaggcctcgaggctgag
ctggcccgcgtggaagcgcagcggcgagctgcggatgcccagctgggaggcctgcgctcg
gccctgcgccgcggcctgggcctcggccgcgcgcccagtcctgccccgcggccatcgccg
gactccccggtccgaggcgcacccactggaggaagcggggaggggttcagcagccccagc
tccttagaacgcagccctgggtctgaaccaccatccccaggacctgccacctccccggca
cctccagacctggacccagaggcagtgcggggggcccttcgggaattcctgcaggagctg
cggagcgcccagagagagcgggacgagcttcggacccagacaagaaccctgagtcgccaa
ctgaccgaggtggaggctgagagggacagcgcgacctcacgggcaaagcagctgcagaag
gctgtggccgagagcgaggaagcccggcgcagtatggatgggcggctgagtggggcccag
gcgaagctggcactgcaggaggagagcatgcagcgcagtgagcgggagcgcagggccgca
ctggaccaggtggctgccctggagagaagcctgcaggccaccgaggctgagcaccgggtg
agccaggagaagatgagcaagatgaaggccaacgaggtgaagctggagagtgacaagcgg
cgcctgaaggaggtcctggatgcctccgagagccgcaccatcaagcttgagctgcagcgg
cgctcactcgagggggagctgcagcgcagtcgcctgggcctgagtgaccgtgaggcccag
gcccaggccctccaggatcgggtagactccctgcagagacaggtggcagacagtgaagtg
aaggcggggaccctgcagttgactgtgaagcggctgagcggggtcctgtccaaggtggaa
gagagtgagggggccctgcggaacaaggtgcagggcctgacagagaccttggcccagaac
agtgccagcctcaccagcacccaggacaagaacctgcacctgcagaaggccctgacagcc
tgtgagcatgaccgacaagtgctccaggaacggctggaggccgcccggcaggcgttatct
gaggcacggaagcagagcaactccctaggggagcaggtgcagacgatgcggggtgagctt
gctgacctggagctgcagcggacagaggctgagggccagctgcaacagctgcaagaggtg
ctgcggcagcggcaggagagcgaggctgtagccctgcacacggtgcagaagctgcaggac
gagaggcggctgctgcaggagcgcctgggcagcctgcagcgcgccctggcgcagctggag
gctgagaagcaggaggcggagcggtcagccctgcggctggagaaggacagggctgccctc
aggagaatgctggacaaggtggagagggagaagcttcgcagccacgaggatacagtgcgg
ctgagtgccgagaagggccgcctggaccgcacactcacgggggctgagctggagctggct
gaggcccagaggcagatccagcagctggaggcccaggtggtggtgatggagcaaaaccac
agtcctgcccagctggaggcagatgagcagcagcggctagagctgcagcaggaggtggag
cgcctgcgcagtgcccaggtgcagacggagcgcaccctggaggcgagggagcgtgcccac
cgccagagggtgcgtgggctggaggagcaggtgtccacactgaaggggcagttgcagcag
gagttccgaaggagctcagcaccctttactccaccctctggtccctcggggaaataa
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