Trichechus manatus latirostris (Florida manatee): 101358623
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Entry
101358623 CDS
T05135
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101358623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101358623
Enzymes [BR:
tmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
101358623
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
Other 90S particles
101358623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
101358623
NCBI-ProteinID:
XP_004387297
UniProt:
A0A2Y9E577
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MAAPSGGFQPRERRGGEQEQGWDVVAPKRPRLGAGSKIGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFST
QVVSDVRELVPSSDPIVFVVGAFAHGKVNVEYTEKVVSISNYPLSAALTCAKLTTAFEEV
WGVI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccagtggtggattccagcctcgtgaacgacgcggtggagagcaggaacag
ggctgggatgttgtggcgcccaagaggccccgactcggggcaggaagcaagattggaggc
cgtaggctcattgtggtgctggaaggggccagtctggagacagtcaaggtagggaagaca
tatgagctactcaactgtgataagcacaagtctatgttgttgaagaatggacgggaccct
ggggaagtaagaccagacatagcccaccagagtttactcatgctgatggacagtcccctg
aaccgagctggcttgctacaagtttacatccacacccagaagaatgtgctgattgaagtg
aacccccaaactcgaattcccagaacctttgaccgcttctgtggcctcatggttcagctt
ttacacaaactcagcgttcgagcagctgatggcccccagaagctgttgaaggtaattaag
aatccagtgtcagatcacttcccagttggatgtatgaaaattggcacttctttttccacc
caagtcgttagtgatgtacgagagttggtgcccagcagtgaccctattgtttttgtggtg
ggagcctttgcccatggcaaggtgaatgtggagtatacagagaaggtggtgtccatcagc
aactatcccctttctgctgccctcacctgtgcaaaactgaccacagcctttgaagaagta
tggggggtcatctga
DBGET
integrated database retrieval system
