Pyrobaculum neutrophilum: Tneu_1963
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Entry
Tneu_1963 CDS
T00682
Name
(GenBank) RNA polymerase Rpb2 domain 6
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tneu_1963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_1963
Enzymes [BR:
tne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tneu_1963
Transcription machinery [BR:
tne03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Tneu_1963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ACB40878
UniProt:
B1YC24
LinkDB
All DBs
Position
1727137..1730520
Genome browser
AA seq
1127 aa
AA seq
DB search
MVDLLPLPVIVSQQDGKFPTRDDRWVLVERFIKDKGLANHQIKSFNDFLDKKLPKIVEDF
KVVETEIKGLKLVLERIEVGWPKIKESDGSESIIYPMEARLRNATYSAPLYLTATLYVDD
EPYVTETFYIGELPIMVKSKRCNLTRLRPGEYIKKFEDPQDFGGYFIINGSERVIISQED
LVADRPIYDRGDKPSVKYIAKTISTGIGYRSTLTVELNRDGVIYVTLSAMPVKIPFPIYM
KALGLETDEDVVKAVSDDPEIQKELLPSLIAANQIAITREDALDFIGGKVAVGQPKPIRV
EKAYQLLDKYFLPHLGTTTPDEKRQQEIRLKKALMLGQIVKGLVELQLGRRKPDDKDHVA
NKRVRLVGDLMTQLFRTVLKQFLQELKSQLEKYYARGRIPHIQTIVRPDIITERVRQALA
TGNWVGGKTGVSQILDRTNYMSTLSYLRRVVSSLSRTQPHFEARDLHPTQWGRLCAVETP
EGQNVGLVKNLALLAEITTGVDEGEVEQLLYNLGVVPLLKAREEGIRGAEVYINGRLIGV
HPNPEELAKTVRGMRRQGKISDEINIAYLDGSVYVNCDGGRIRRPLLVVEGGRLKLTKEI
VEKVRRGDLTWDDLVKMGVIEYLDADEEENAHIAVDPDVDLSNYTHVEIVPSSILGAVGS
IIPYLEHNQSPRNQYEAAMAKQSLGLPQSNFLYKLDSRGHMLYYPERPIVTTRGLELVGY
SRRPAGQNAVVALLTYTGYNIEDAVILNKASVERGMFRSVFYRTYETEEQKYPGGEEDKI
EIPDSSVKGYRGPEAYSHLDEDGIAPPEVYVSSNEVLVGKTSPPRFYTTLEAERILKERR
DASVAVRRGEKGIVDRVIITESPEGNKLVKVRLRELRVPELGDKFASRHGQKGVVGMLLR
HEDMPFTEDGIVPDIIVNPHALPSRMTVAQLLESMAGKVGASLGALVDATAFEGVKEEDL
RKLLLKLGYKWDGKEVMYSGITGERLVADIFIGVVYYQKLHHMVADKIHARARGPVQILT
RQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCELCGLPAYLDAK
SNKPKCPIHGDTGQFAKVVVPYAYKLLLQELIALGIYPKLELTEVLE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggtagatctcctcccccttcccgtcatcgtaagtcagcaggacgggaagttccccacg
agagacgacaggtgggttctcgtggagaggtttataaaagacaaggggcttgctaaccac
cagataaagtcctttaacgatttcttggataagaagttgcccaagatagtggaggacttc
aaggtggttgagacggagataaagggtctcaagttggttcttgagcggattgaggtgggg
tggcccaagattaaggagagcgacggttccgaatccataatatatcccatggaggcaagg
ttgcgcaacgccacgtattcggctccgctgtatctcaccgcgactctatacgtcgacgac
gagccgtatgtcaccgagactttctacatcggcgagttgccgataatggttaagtcgaag
aggtgtaacctcaccaggttgaggcctggcgagtatataaagaagtttgaagatccgcag
gacttcggcggctacttcatcatcaacgggagcgagcgggtgataatatcccaggaggat
ctggtggcggataggcctatctacgacaggggggataagccctctgtaaaatacatcgcc
aagacgatatccacaggcatagggtatagaagcacgctgactgttgagcttaaccgagac
ggcgttatctacgtcaccctttccgcgatgccggtcaagataccgttcccgatctacatg
aaggccctggggcttgagacggacgaagacgtcgtcaaggccgtgtccgacgacccggag
atccagaaggagcttctgccgtctctcatcgccgccaaccaaatagcgattacgagggaa
gacgccctagacttcatcggcggcaaggtggcggtgggtcagccaaagcccattagggta
gagaaggcgtatcagctcctcgacaagtacttcctcccgcatctgggcactacgaccccc
gacgagaagaggcagcaggagattaggcttaagaaggcgttgatgttggggcagatcgta
aagggcttggtcgagttgcaactgggccgtaggaagcccgacgataaagaccatgttgcc
aacaagagggttaggctagtcggcgatttgatgacccagctgttccgcaccgtcttaaaa
cagtttctacaggagctcaagagccagcttgagaagtactacgccagggggaggataccc
cacatacagacgatagtgaggcccgacatcatcaccgagcgcgtgaggcaggccttggcc
accggcaactgggtaggcgggaagacgggcgtgtcccagatcctagaccgcaccaactac
atgtctaccctgagctacctcaggcgggtggtgtcgtcgctgtctaggacccagcctcac
ttcgaggcgcgcgacctacaccccactcagtggggcagactgtgcgccgtggagaccccg
gaaggccagaacgtgggcttggtcaagaacctggcgctactcgccgagatcaccaccggg
gtagacgagggggaggtggagcagttgctgtacaacctgggcgtggtgcctctgttgaag
gccagggaggagggcatccgcggcgccgaagtctacataaacggcagattgatcggcgtg
catccaaacccggaggagctcgcgaaaaccgtcaggggcatgaggaggcaggggaagatc
agcgacgagataaacatagcatacctagacggctccgtgtatgtgaactgcgacggcggc
cgcatcaggaggcctttactcgtcgtcgagggcgggaggctcaagctgacgaaggagatc
gtggaaaaggtgagacgtggcgacttgacttgggacgacttggtcaagatgggggttatc
gagtacctagacgccgacgaggaggagaacgcccacatcgccgttgacccagacgtcgac
ctcagcaactacacacatgtggagatcgtgccgtcgtctatactcggcgccgtgggctcc
attatcccctacctcgagcacaaccagtcgccgcgtaaccagtacgaagcagctatggcg
aagcagtcgctcggcctaccccagtccaacttcttgtacaagctggactcgcggggccac
atgttgtactaccccgagaggcctatagtgaccacgcgcggtttggagctcgtgggctac
tccagaaggccggcgggccaaaacgcggttgtggcgctactcacctacacgggctacaac
atagaggacgccgtgatcttgaacaaggcctctgtggagcgcggcatgttccgctcggtc
ttctacagaacgtacgagaccgaggagcagaagtacccaggcggggaggaggacaagata
gagatccccgacagctccgtcaagggctacaggggcccggaggcctacagccacctggac
gaggatggaatagccccgcccgaggtctacgtcagtagcaacgaggtcctggtggggaag
acctctccgccgaggttctacacaacgctggaggccgagcgtatcttgaaggagaggagg
gacgcctctgtggctgtgagaaggggggagaagggcatcgtggacagggtcatcattacg
gagtctccagagggcaacaagctcgtcaaggtgaggttgagggagctgagggtgccggag
cttggggataagttcgcctcccgccacgggcagaagggggtcgtgggcatgttgcttagg
catgaggacatgccgtttaccgaagacggcatcgtgcccgacataatagtcaacccacac
gcgttgccgtcgcgtatgaccgtggcgcaactactcgagagcatggccggcaaagtaggc
gcctccctcggcgctttggtagacgccacagccttcgagggggtgaaggaggaggatctg
aggaagctgttgcttaagctcggctacaagtgggacggcaaggaggtcatgtacagcggc
atcaccggcgagaggctggtggccgacatattcataggcgttgtctactaccagaagcta
caccacatggttgccgacaagatccacgcgagggcaaggggccccgtccagatcttgact
aggcagccgaccgaaggccgctcccgcgagggcggtctgaggcttggcgaaatggagaga
gacgtgttgatagcccacggcgcctcggccctgctgtatgagaggcttgtggagtccagc
gacaaatacaccatgtatgtctgcgagctctgtggactaccggcgtatctagacgccaag
tcaaacaagcctaagtgccccatacacggcgacacaggccaattcgccaaggtggttgtg
ccctatgcctacaagctacttctacaggagctcatagcacttgggatatatccaaagctg
gagctcaccgaggtgttggagtag
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