Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030712G001
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Entry
GSTEN00030712G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08131
collagen type IX alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00030712G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00030712G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00030712G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tng00535
]
GSTEN00030712G001
Proteoglycans [BR:
tng00535
]
Extracellular matrix (ECM) proteoglycans
Others
GSTEN00030712G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
CAG09446
UniProt:
Q4RQ86
LinkDB
All DBs
Position
17
AA seq
674 aa
AA seq
DB search
EGPPGPPGPAGVPGINGIDVSPFSSNILSKCTKYFVKILRFPAVLGGKRSRRRGRPSCKP
GSPGLPGNPGNDGLTGPIGEPGLDGLPGQKGEPGKPGPRGAAGVGPDGPPGPPGPGGLLG
EMGKSGPVGAMGVRGPQGPRGPTGPRCPNSCPPGTPGHPGLPGMKGHKGVKGDAGEPGKQ
GHKGEEGEQGGPGEVGAQGPTGPQGIRGATGLMGPKGEMVHTFSIPKHRGDFILDSWLLI
CCLHGQMILVLFSCRVPEVLMEIRGDGGQRGVMGEPGPPGEKGTQGPRGITGVPGPKGEA
GLPGVDGREGIPGMPGAKGSIGKAGAPGEIGPQGFPGLPGSPGPKGSSGSKGDAGQPGLP
GTIGSAGKPGERGEQGEVGPVGPIGEPGDIGQQGPRGPAGKPGARGPKGDPGLPGIPGPP
GSRGEKGERGESGEPGPKGDQGAQGDEGNPGDKGDVGEAGESGPKGEVGNPGEPGNRGPE
GNRGQSGIEGPPGTAGPRGMQGDRGAPGVRGTQGPPGKEPSDQHIKQVCMRVMQEQLAQL
AASLRRPETGVTGLPGKPGLPGPPGIPGDSGFPGHAGARGLPGLKGPPGPLGKKGQKGEI
GDRGSRGPTARGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGRPGVPGLPGVPGPPGAHGL
NGYCDPSACNLQAG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gaaggaccccctggccctccaggacctgcaggtgtaccaggaatcaatggcattgacgta
agccctttctcctccaacattctaagtaagtgtaccaaatattttgtaaaaatcttaaga
tttcctgccgttttagggggaaagaggagcagacggagaggaaggccttcctgcaaaccg
ggatctccaggactccctggaaatcctggaaatgatggtttgaccggcccaattggagag
cccggcctcgacggtctccccggacagaaaggcgaacctggaaagcctggaccccgagga
gcagctggagttgggccagatgggcctcctggaccaccaggaccaggtggacttctgggt
gaaatgggaaaatctgggccagtaggagccatgggcgttagaggaccacagggaccacgt
ggaccaacaggacccagatgtccaaactcctgcccacctgggacccctggacatcctggg
cttcctggcatgaagggccacaaaggtgtcaaaggtgatgccggtgaacctgggaaacaa
ggccacaagggcgaggagggagagcagggtggcccgggggaggtcggcgctcaaggacca
acgggtcctcagggaatccgtggtgctacaggattaatgggccccaaaggggagatggta
cacaccttttccatccctaagcatagaggagatttcatacttgatagctggttgctgatt
tgttgcctgcatggacagatgatactagtcttgttctcctgtagggttccagaggtcttg
atggagatccggggagacggaggccagagaggcgtgatgggcgagcctggacctccaggt
gagaagggcactcaagggccaagaggaatcacaggtgttcccggtccgaagggggaggct
ggcttaccgggtgttgatgggcgtgagggtatacctgggatgcccggagcaaagggaagt
attgggaaggcaggcgctccaggagagatcggccctcaggggtttcctggtttgcctgga
tcccctggaccaaaaggctccagcggctctaagggcgatgctggacaacctggtctcccg
ggaacaatagggtcagctgggaaaccaggtgaacgcggcgagcagggcgaagttgggcct
gtcggacctatcggtgaaccaggagatataggacagcaaggccctcggggtccggctggc
aagccaggtgccaggggaccgaaaggtgaccccggtcttccgggtatcccgggtcctcca
ggctcacgaggggaaaagggagagaggggagaaagtggagaaccaggacccaaaggagat
cagggagcacaaggtgatgaagggaacccgggagacaaaggcgatgttggcgaagcagga
gaatctgggcctaaaggagaggtcggtaacccgggagaacctggaaacaggggcccggag
ggcaaccgaggccagtctggcattgagggcccgcctggcacagctggaccacggggcatg
caaggtgacaggggggctcctggagtcagaggcactcagggtccaccgggaaaggagccg
agcgatcagcacatcaaacaggtttgcatgcgagtcatgcaagaacagctggcccagctg
gctgcaagcttgcggaggccagagaccggtgtgacgggtctacctggaaaaccaggactt
ccaggacctcctgggatcccgggcgacagcggcttccccggacacgctggagcaagagga
cttccgggtctaaaaggaccaccaggaccgctaggaaagaaagggcaaaaaggtgaaatt
ggagacagagggtccagagggcccacggcaaggggacccaaaggccagccggggcctcct
ggacttcctggtgaaccaggcaaacctggctacggtcaggacggccgagacgggcagagg
gggcgtccaggcgtccccggactgcccggcgtacctggtcctccaggtgcgcacggtctc
aacggttactgtgacccatcggcctgcaacctccaggcaggg
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