Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034268G001
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Entry
GSTEN00034268G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06759
contactin 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
GSTEN00034268G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00034268G001
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tng00537
]
GSTEN00034268G001
Cell adhesion molecules [BR:
tng04515
]
Immunoglobulin superfamily
Contactins
GSTEN00034268G001
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tng00537
]
Others
GSTEN00034268G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Fox-1_C
V-set
Motif
Other DBs
NCBI-ProteinID:
CAG12108
UniProt:
Q4RHM4
LinkDB
All DBs
Position
19
AA seq
1193 aa
AA seq
DB search
MAAAALRLLGLLTFTSLTDQCHVPVVPNKRFPGRLSSLPGRWRRDNWEIKLMEQPDEHYS
LVGGNLVINSPKKRKHAGTYICVARNIYGTVISKEARLKFGCERLSRAGSSQRRLYPLTC
RFCLRGRSGGVSSGGERPGVRQRRPGSRAAVRSSESVARCVKASRPGPFGPEQLLCMCVW
LRRGGHLPLDLQRVPRLPARRPQALRLPEEREPVHLQSGSSGRRELLLLRLQPHDREERL
LQIHPTHPFTTRGRGEEVPSRHQGEVPRHHRHVGLQHHPGMLRFGEPHTPYCLEEGGCHG
PPAQPRDQRIGRRAAPVQRAVRRRGRLRVRGHQHEGEGLAQGLALRGVCVRRSCLCSRVG
GNHQQHPDRHRLSAHHALRGRGEAVPGHPLVQRRIHGEDFTRFKPRFKQTCQIPSAACVS
QYGKGELQFSSLTFADSGMYQCVAENYWGIKYANAELRVIAFAPTFELNPVKKQLLGARD
RRVVIECKPRAAPRPQFTWTKGKELLFNNSRLSILYDGSLEILSATKDDEGVYTCLAENG
RGRANSSGYLTITEATGITVAPEDSEAKVGDEVVLRCAASFDPTLDITFIWAIDFRVIDF
DSEWQHYERLWRDDGSGDLKIKNVQIWHEGRYTCTAQTVVDSDTAYADLKVVGVPGPPGV
IRVEEIGNTWVKLLWTKGADHNSPILYHTIQTRHYWSLNEDDWRNASTCSVERAEVTDLY
PWLEYQFRIIATNEHGSGEASIPSLKVKTWDAAPAVSPTDVAGYGGRNGEIVITWTPVEP
WHFYGKSFGYIVAFKPHDAYDWLYETISDPETRRYVHRDSYFIPTEEDFQVREFQVKIKS
FNVKGDGPYSLTKVIYYPRDVPTEPPTDVYARPVSSTEALVWWLPVVDTGTGLQQYIEGY
QVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDGHYLIEVRAYNGAGLGPPGEHCEMF
TKRAPPPEPPRMWRYISWTGKWLYVWWDHIQYDWFGNISFPLYYKVMFRKTGYIYGKVYI
TGWHFMDFPMPQLGDYELMVRGRYEGGDGPFYFDLMRVRDRGRLVNNATAKVMTNKKMVS
PFPNGDTLGTLPYAAWKLSPMVGTVYAPELYAVFFGIFSSIFLPRNHIFCFVLVFFPPLC
KVPGFPYPSAAAATTAAAAAAAFRGAHLRGRGRPIYSAVRAAVPQPAISAYPG
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcgttacgcctcctgggtctcctcaccttcacctctctcacagatcaa
tgtcacgtgccggtggtcccaaataagcggtttcctggacgcctctcttcccttcctggc
agatggcgccgcgacaactgggagatcaagctgatggagcagcccgacgaacactacagc
ctcgtgggggggaatctggtgattaacagccccaagaagaggaaacacgctgggacgtac
atctgcgtggccaggaacatctacggcaccgtcatcagcaaggaggcccggctcaagttc
ggatgtgagcgtctgagccgggccgggtcctcccagcgccgcttgtacccgctaacgtgt
cgcttctgtctccgcggaagatctggaggagtttcctcaggaggagagagacccggtgta
cgtcaaagaaggccagggagccgtgctgctgtgcgctcctccgaaagcgtggccaggtgc
gtgaaagcgtcgcggccggggccgtttggcccggagcagctcctgtgcatgtgcgtctgg
ctccgcagaggaggtcacctaccgctggatcttcaacgagttccccgtcttcctgcacgc
cgaccgcaggcgcttcgtctcccagaagaacgggaacctgtacatctccaaagtggaagc
tcaggacgccgggaactactcctgcttcgtctccagccccatgatcgggaagagcgtctt
ctccaaattcatcccactcatcccttcactacccgaggaaggggagaggaagtacccagc
agacatcagggtgaggttcccagacaccaccgccatgttggcctccaacatcaccctgga
atgcttcgctttggggaaccccataccccatattgtttggaggaaggtggatgccacgga
cctcccgcccaaccacgagatcagcgaatcgggcgccgtgctgcacctgtacaacgtgca
gtacgaagacgtgggcggctacgagtgcgaggccatcaacacgaaggggaaggactggca
caaggcctggctctacgtggagtgtgcgtccgacgctcctgcctctgctccagagtgggc
ggaaaccatcaacaacacccagatcgacatcggctcagcgcacaccatgcgctgcgtggc
cgcggggaagccgttcccggccatccgctggtacaaagacggatacatggtgaggatttc
acacgattcaagcccaggttcaagcagacatgtcaaattccgtcggccgcgtgtgtttcc
cagtacggaaaaggcgagctgcagttttccagcctgacctttgccgactcggggatgtac
cagtgcgttgcggagaactactggggcatcaaatatgccaacgctgagctgcgcgtcatc
gcgtttgctccgacgtttgagttgaacccggtgaagaagcagctgctgggggccagagac
agacgcgtggtgatcgagtgcaaaccccgagctgccccccgaccgcagttcacgtggacg
aagggcaaagagctgctcttcaataactcccgcctttccatcctgtacgacgggagcctg
gagatcctcagtgccaccaaggacgacgagggcgtgtacacgtgcttggctgagaacggc
cgagggagggccaacagctctggctacctcaccatcacagaggctactggcatcactgtg
gcccctgaagactccgaggcgaaggtgggcgacgaggtggtgctgaggtgtgcggcgtcc
ttcgaccccacgctggacatcacgttcatctgggcgatagacttcagggtcatcgacttt
gactcggagtggcagcactacgaacgtctttggcgcgacgatggcagcggcgacctgaaa
ataaagaatgtccaaatctggcacgaaggtcgctacacgtgcaccgctcagacggtggtg
gacagtgacacggcatacgcagatctaaaagtcgtgggggtgccggggcctcctggggtg
atccgtgtggaggagatcgggaacacgtgggtgaagctgctgtggactaaaggagcagac
cacaacagccccattctctaccacaccatccagaccagacactactggtctctgaatgag
gacgactggaggaacgccagcacctgtagcgtagaaagggcagaagtgacagatttatac
ccctggttggagtatcagttcaggatcatagccaccaacgagcacggctccggagaggcc
agcatcccatcgctcaaggtcaaaacttgggacgctgctcctgcggtttcccccaccgac
gtggctggttacggaggcagaaacggcgaaatcgtgatcacgtggacacctgtggagcca
tggcatttctacggcaagtcgttcggctacatcgtggcattcaagccccacgatgcctac
gactggttgtacgagaccatctctgacccggagacgaggcgctacgtccacagggactct
tactttatccccactgaggaagacttccaggtccgagagtttcaggtgaagattaagtct
tttaatgtcaaaggcgacggaccctacagcctcaccaaggtcatctactatccaagagat
gtaccaacagagcctccgacagatgtgtatgcccgaccggtgtcctccaccgaagctctg
gtgtggtggttgccagtggtggacactggcacaggcctgcagcagtacatcgaggggtac
caggtgaagtactggaggaagtacgacgatccagaaccgggagcaaaccgtatctttgtc
cccgcaacagtcaaccaaacccggcttgagaacatgctgccagacggtcattacctcatc
gaggtccgcgcttacaacggagcgggtttgggaccgcccggagaacactgtgagatgttc
accaagagagcaccaccaccagaacctcctaggatgtggcgctatatctcctggactgga
aagtggctgtacgtgtggtgggatcatatccagtacgactggttcgggaatatttcattt
ccactctactacaaggtcatgttcaggaaaacaggctacatctacgggaaagtttacatc
accggctggcatttcatggacttccccatgcctcagcttggagattacgagctcatggtt
cggggccgctatgaaggcggagacggcccattctattttgacctgatgagagtgagagac
agggggcggctggtgaacaatgccactgccaaggtgatgacaaacaagaagatggtcagt
ccctttccaaatggagacactcttggcacgctgccttatgcagcgtggaaattaagtcca
atggtgggaactgtgtacgctccagagctctatgcagtgttttttggtattttctcttca
atttttctacccagaaaccacattttctgttttgttttggttttttttccccccctttgt
aaagttccagggtttccttatccgtctgcagcagcagccactacagcagcggcagcagca
gcagcatttcgtggtgctcacctcaggggccgaggccgacccatctatagtgcagtacgt
gctgctgtgccacagccagccatttctgcataccctggg
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