Thioalkalivibrio nitratireducens: TVNIR_3185
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Entry
TVNIR_3185 CDS
T02408
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
tni
Thioalkalivibrio nitratireducens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
PAS_3
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AGA34823
UniProt:
L0E0K8
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Position
complement(3299230..3301575)
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AA seq
781 aa
AA seq
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MLIEHGQGSNLKGSTREAQPSRDHARHAGMRVETGASATRFGPDANLLPGAHPGRRCSGY
TWEMHEDSATGSRAQQGETDHSVSAAGPDSPERFTAERLLHCYRELFDRAPVGYMVVDRR
GRILKVNQTASLLLSTEPSRLVGRRIGVIVAQPERSRLRRFLAGVFDEPEQRTREITLVT
RGSPATWIRLQARADGPGHRALIVATDFRDLGVSPDEMEIAVSVYQVLDHAVMIADADNR
IVSVNPRFTEITGYPPGEAVEQRTNLLKSGCQDDAFYQRMWHALETNGRWQGELWNRRKS
GEEFLESLSIHTLRDREGRVLRRVALFSDITDQRRAVEEAQRQANYDPLSGLPNRSLFLD
RLEQEVRKGQRNGRSVALLYLDLDHFKEVNDTLGHQAGDRLLQEAARRIGASVRETDTVA
RLGGDEFTVVMADLSELNRVDVVAQEIIDALARPFPLGSEVVQVSASLGIAFFPADAGDA
AELVDHADRAMYAAKKAGRNRYQYFTPQLQSSLRERHRRIADLRNALSGRQFRVYLQPAV
DLVSGEIRLLEALLRWQHPDQGLILPAQFLPLAEDIGIMGEIGELVFENVFGVIKALEGT
PAGSSLRIAINQSLRELGHGRGGRGWVTHLQEYGLPVERVVFEITERTLIEGGTMVESQV
RRQIERGVAVALDDFGTGQSSMTCLERIPFEYVKLDGSVVRRIPHDRPARAFLDAAIVLT
GSLGIRLIAEGVETEAQRDYLRAAGCGFAQGFLLGAPVPAEHYQRVRGAAQANPRRRPGA
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgagcacggccagggttcgaacctgaaaggttcgacgcgcgaggcgcagccg
agccgcgaccatgcccgtcacgccggaatgcgggttgagacaggagccagcgccacgcgg
ttcgggcctgacgcgaaccttctgcctggcgcccatccggggcgcaggtgctccggctat
acttgggaaatgcacgaggattcggcaaccgggagtcgcgcgcagcaaggcgaaaccgac
cattctgtctccgcggccgggccagattcaccggagcgctttacggccgagcgcctgctg
cactgctaccgcgaactgttcgaccgggccccggtgggttacatggtggtggaccggcgc
gggaggattctgaaggttaaccagaccgcgtcgctactgctgtcgaccgagcccagcagg
ctcgtcggccggcgcatcggggtgatcgtggcgcagccggagcgcagccggctccggcgt
tttctggccggtgttttcgacgagccggagcaaaggacccgggagatcacgctcgtcacc
cgtggtagtcctgcgacctggatccgtctgcaggcgcgggccgacggtcccgggcatcgt
gcgctgatcgtcgcgaccgattttcgcgacctcggggtcagtccggacgagatggagatc
gcggtctcggtttaccaggtgctcgaccatgcggtgatgatcgccgatgccgataaccgc
atcgtttcggtgaacccgcggttcacggagatcaccggttacccgccgggcgaggcggtg
gagcaacggaccaacctgctgaaatcgggttgccaggatgacgctttctatcagcggatg
tggcacgcgctcgagaccaacgggcgctggcagggcgagttatggaaccggcgcaagagc
ggcgaggagttcctcgagtcgctgtcgatccataccctgcgcgaccgggaaggacgcgtt
ctgcggcgcgtggcgctgttttccgacatcaccgaccagcgccgcgcggtggaagaggcc
cagcggcaggccaattacgatcccctgagcgggctaccgaaccggagcctgttcctcgac
cgcctggagcaggaggtgcgcaaggggcagcgcaacgggcgttccgtggcgctgctgtac
ctggatctcgatcacttcaaggaggtgaacgataccctcgggcatcaggccggcgaccgg
ctgctgcaggaggcggcacggcgtatcggggcgagcgtgcgcgaaaccgataccgtggcc
cgtctggggggcgacgagttcacggtggtgatggccgacctgagcgaactcaaccgtgta
gacgtcgtggcacaggagattatcgatgccctggcccggccgttcccgctcggttcggag
gtggtgcaggtctccgcgagtctcgggatcgcgttctttcctgcagatgccggtgacgct
gccgaactggtcgaccacgcggaccgcgcgatgtacgccgccaagaaggctggcaggaac
cgctaccagtacttcacgccgcagctgcagtcgagcttgcgcgagcggcatcgacgcatc
gccgacctgcgcaatgctctgtcggggcgccagttccgggtctatctgcagccggcggtc
gatctggtttcaggggagatacgcctgctggaggctctgctgcgctggcaacatccggac
cagggcctgatcctgcccgcgcagtttctgccgctggccgaggacatcggcatcatgggt
gaaatcggtgagctggtcttcgagaacgtgttcggtgtgatcaaggccttggagggaacg
cctgccggaagttcgctgcgcatcgcgatcaaccagtcgctgcgcgaactggggcatggc
cgcggtggacggggctgggtgacccacctgcaggaatacgggcttccggtcgagcgggtg
gtgttcgaaatcaccgaacggacgctgatcgagggcggaaccatggtcgagtcccaggtg
cgcaggcagatcgagcggggcgtcgcggtggcgctggacgatttcgggaccgggcaatcg
tcgatgacctgcctcgagcgcatcccgttcgagtacgtgaagctcgacggcagcgtggtc
cgccgcatcccgcacgaccggccagcccgggcgttcctcgatgctgccatcgtgctgacc
ggcagcctcgggatccggctgattgccgaaggcgtggagacggaggctcagcgggactac
ctgcgggccgccggctgcgggttcgctcagggctttctgctgggggcacccgttcccgcc
gagcactatcagcgtgtcaggggcgcggctcaggcgaatccgcgtcgtcgcccgggtgca
gggtga
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