Thermosediminibacter oceani: Toce_0152
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Entry
Toce_0152 CDS
T01289
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
toc03016
]
Toce_0152
Enzymes [BR:
toc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Toce_0152
Transfer RNA biogenesis [BR:
toc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Toce_0152
Prokaryotic type
Toce_0152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADL06943
UniProt:
D9RZP5
LinkDB
All DBs
Position
145176..145907
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AA seq
243 aa
AA seq
DB search
MNVKILLEYDGTNYHGWQKQNNALSVQEVLEKAIYALTGERVSIIGAGRTDAGVHARGQV
ANFRTNTRIPVERLPYAINSKLPEDIAVKGAEAVPDDFHARYSAKAKVYTYSIYNAPFPS
PLLRRYSYFFPLPLDVEAMRRAAKAFIGVHDFAAFRASGSSVKTSVRNITRLDVKKCGKL
LTIEVEADGFLYNMVRIIAGTLLEVGTGKKDPEEIPSIIESRDRERAGVTLPAHGLCLEK
VIY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtaaagatcctgctggagtacgacggcaccaattaccacgggtggcagaagcag
aacaacgccctttccgtccaggaagtgctggagaaggcaatatatgccctgacgggagaa
agggtaagcataatcggagccggcaggaccgatgcgggcgttcacgctaggggacaggtg
gccaatttccgaacgaatacccgcataccggtcgagaggctgccgtacgccataaacagt
aaactgcccgaagacatagcagtcaaaggtgccgaagcggttcccgacgactttcacgcg
cgctacagcgccaaggccaaggtgtacacctatagcatatacaatgccccttttccgtcg
cctctcctgcggaggtacagctatttcttcccgctgccgctggacgtggaggcgatgaga
agagcggcaaaagcctttataggcgtccacgattttgcagctttcagggcgtccggaagc
tcggtaaagacgtcggttagaaatattacgaggctggatgtgaaaaagtgcgggaagctt
ttaaccatagaggtggaagccgacgggtttttatacaatatggtgaggattatcgcaggc
accctgctggaggtagggacgggtaaaaaggatccggaagagataccgtcgattatagag
tcccgggaccgggaaagagccggggtgactctgccggctcacggactctgcctggaaaaa
gttatatactga
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